RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 EDAQ92838 391 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 INTS14Q96SY0 518 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 KCNK15Q9H427 330 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 HRASLS2Q9NWW9 162 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 TAS2R3Q9NYW6 316 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 GDE1Q9NZC3 331 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 PLCL2Q9UPR0 1127 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 ERVK-19Q9WJR5 959 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 MPDZO75970 2070 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 PHYHO14832 338 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 NDUFA2O43678 99 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 RAB3DO95716 219 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 PRKACAP17612 351 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 RAB3AP20336 220 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 ACHEP22303 614 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 KIR3DL2P43630 455 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 DMWDQ09019 674 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 GRM7Q14831 915 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 MESTQ5EB52 335 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 WDR38Q5JTN6 314 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 TMED4Q7Z7H5 227 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 TMEM17Q86X19 198 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 GATSQ8NAP1 163 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 CLRN3Q8NCR9 226 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 LRRC46Q96FV0 321 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 LPAR4Q99677 370 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 CHD7Q9P2D1 2997 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 PLATP00750 562 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 ASAH2BP0C7U1 165 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 CCR4P51679 360 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 DEFA5Q01523 94 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 RPL18Q07020 188 aaKnown RBP15.89■□□□□ 0.13
SYNE3-202ENST00000553340 SRSF5Q13243 272 aaKnown RBP15.89■□□□□ 0.13
SYNE3-202ENST00000553340 TMEM205Q6UW68 189 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 STEAP2Q8NFT2 490 aa15.89■□□□□ 0.13
SYNE3-202ENST00000553340 GPN3Q9UHW5 284 aaPredicted RBP15.89■□□□□ 0.13
SYNE3-202ENST00000553340 MRTO4Q9UKD2 239 aaKnown RBP15.89■□□□□ 0.13
SYNE3-202ENST00000553340 KANTRA0A1W2PQU2 76 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 SULT1C2O00338 296 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 EIF4E2O60573 245 aaKnown RBP15.88■□□□□ 0.13
SYNE3-202ENST00000553340 CD8AP01732 235 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 FNTBP49356 437 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 TOMM20Q15388 145 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 KLHL26Q53HC5 615 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 TMEM229BQ8NBD8 167 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 TSPAN32Q96QS1 320 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 OR5H14A6NHG9 310 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 TGFBR3LH3BV60 316 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 APBB3O95704 486 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 FAM74A1Q5RGS3 127 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 EEF1A1P5Q5VTE0 462 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 MOB3CQ70IA8 216 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 C16orf52Q8NHV5 167 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 DGAT2Q96PD7 388 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 SYT4Q9H2B2 425 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 TMEM185BQ9H7F4 350 aa15.88■□□□□ 0.13
SYNE3-202ENST00000553340 ZNF230Q9UIE0 474 aaPredicted RBP15.88■□□□□ 0.13
SYNE3-202ENST00000553340 LINC01553A4QN01 128 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 MPTX1A8MV57 137 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 HCRTR1O43613 425 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.87■□□□□ 0.13
SYNE3-202ENST00000553340 LRRC69Q6ZNQ3 347 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 KCNRGQ8N5I3 272 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 PATE1Q8WXA2 126 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 ASB12Q8WXK4 309 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 SEH1LQ96EE3 360 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 NPAS1Q99742 590 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 CYB5R1Q9UHQ9 305 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 ARHGEF17Q96PE2 2063 aaPredicted RBP15.87■□□□□ 0.13
SYNE3-202ENST00000553340 AMY2AP04746 511 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 HPGDP15428 266 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 CD96P40200 585 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 KIR2DL1P43626 348 aaPredicted RBP15.87■□□□□ 0.13
SYNE3-202ENST00000553340 GPR3P46089 330 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 MC2RQ01718 297 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 ZNF345Q14585 488 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 GLT8D1Q68CQ7 371 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 ELP2Q6IA86 826 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 LIN54Q6MZP7 749 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 FDX2Q6P4F2 183 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 OR5T2Q8NGG2 359 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 OR5M8Q8NGP6 311 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 OTOSQ8NHW6 89 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 MARC2Q969Z3 335 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 AMELYQ99218 206 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 PLA2G2FQ9BZM2 168 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 ELOVL3Q9HB03 270 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 BARX1Q9HBU1 254 aaPredicted RBP15.87■□□□□ 0.13
SYNE3-202ENST00000553340 MYOZ1Q9NP98 299 aaPredicted RBP15.87■□□□□ 0.13
SYNE3-202ENST00000553340 COMMD9Q9P000 198 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 EPHA6Q9UF33 1036 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 KCNG2Q9UJ96 466 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 MRPS33Q9Y291 106 aaKnown RBP15.87■□□□□ 0.13
SYNE3-202ENST00000553340 C2orf16Q68DN1 1984 aa15.87■□□□□ 0.13
SYNE3-202ENST00000553340 ARPC4-TTLL3A0A0A6YYG9 625 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 TTLL8A6PVC2 850 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 OR2F2O95006 317 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 RNH1P13489 461 aaKnown RBP15.86■□□□□ 0.13
SYNE3-202ENST00000553340 CNR1P21554 472 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 EGR4Q05215 589 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms