RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SMURF2Q9HAU4 748 aa11.18□□□□□ -0.62
ACTN1-207ENST00000553290 DYNLRB1Q9NP97 96 aa11.18□□□□□ -0.62
ACTN1-207ENST00000553290 MAN2C1Q9NTJ4 1040 aa11.18□□□□□ -0.62
ACTN1-207ENST00000553290 ABCD2Q9UBJ2 740 aa11.18□□□□□ -0.62
ACTN1-207ENST00000553290 SLC7A8Q9UHI5 535 aa11.18□□□□□ -0.62
ACTN1-207ENST00000553290 RPS6KA6Q9UK32 745 aa11.18□□□□□ -0.62
ACTN1-207ENST00000553290 SNX13Q9Y5W8 968 aa11.18□□□□□ -0.62
ACTN1-207ENST00000553290 SONP18583 2426 aaKnown RBP11.17□□□□□ -0.62
ACTN1-207ENST00000553290 SLC22A23A1A5C7 686 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 SH3PXD2BA1X283 911 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 A8MV72 311 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-207ENST00000553290 VWC2LB2RUY7 222 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 J3KTA2 159 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 FFAR1O14842 300 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 SYNGR3O43761 229 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 SNX3O60493 162 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 IGHMP01871 453 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 SAGP10523 405 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-207ENST00000553290 NR4A2P43354 598 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 SLC9A3P48764 834 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 PSME3P61289 254 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 RPL27P61353 136 aaKnown RBP11.17□□□□□ -0.62
ACTN1-207ENST00000553290 MRPS34P82930 218 aaKnown RBP11.17□□□□□ -0.62
ACTN1-207ENST00000553290 LSM11P83369 360 aaKnown RBP eCLIP11.17□□□□□ -0.62
ACTN1-207ENST00000553290 PLP2Q04941 152 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 FXNQ16595 210 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 FAM205BPQ63HN1 556 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 CPLX4Q7Z7G2 160 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 ZNF584Q8IVC4 421 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 NRMQ8IXM6 262 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 SLC30A7Q8NEW0 376 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 FNDC8Q8TC99 324 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 KCNK17Q96T54 332 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 ALG12Q9BV10 488 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 FAM107BQ9H098 131 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 KCNN2Q9H2S1 579 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 MS4A5Q9H3V2 200 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 ANKRD19PQ9H560 264 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 SIAEQ9HAT2 523 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 SPAG4Q9NPE6 437 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 RHCGQ9UBD6 479 aa11.17□□□□□ -0.62
ACTN1-207ENST00000553290 A0A087WUU8 490 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 IQCMA0A1B0GVH7 501 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 EFCAB9A8MZ26 197 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 M0R233 179 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 GMNNO75496 209 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 PRSS23O95084 383 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 ADRA2AP08913 450 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 MAKP20794 623 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 DRD4P21917 467 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 FUT4P22083 530 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 CTXN1P60606 82 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 CD47Q08722 323 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 CARTPTQ16568 116 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 THEM4Q5T1C6 240 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 C6orf52Q5T4I8 152 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 CYB5R2Q6BCY4 276 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 ZNF730Q6ZMV8 503 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 MBOAT2Q6ZWT7 520 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 RRM2BQ7LG56 351 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 OAFQ86UD1 273 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 PRIMA1Q86XR5 153 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 RBM15BQ8NDT2 890 aaKnown RBP11.16□□□□□ -0.62
ACTN1-207ENST00000553290 OR1J2Q8NGS2 313 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 HDAC2Q92769 488 aaKnown RBP11.16□□□□□ -0.62
ACTN1-207ENST00000553290 NMD3Q96D46 503 aaKnown RBP11.16□□□□□ -0.62
ACTN1-207ENST00000553290 FOXN4Q96NZ1 517 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 RBP7Q96R05 134 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 MRPL37Q9BZE1 423 aaKnown RBP11.16□□□□□ -0.62
ACTN1-207ENST00000553290 LRMDAQ9H2I8 198 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 CDH20Q9HBT6 801 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 ZNF346Q9UL40 294 aaKnown RBP11.16□□□□□ -0.62
ACTN1-207ENST00000553290 ENPP4Q9Y6X5 453 aa11.16□□□□□ -0.62
ACTN1-207ENST00000553290 TRAV27A0A087WT01 109 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 A6NIZ1 184 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 SLC2A10O95528 541 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 STAMBPO95630 424 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 SNAP29O95721 258 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 DAOP14920 347 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 NCK1P16333 377 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 GUCA1AP43080 201 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-207ENST00000553290 GZMKP49863 264 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 SELENOVP59797 346 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 RAP1BP61224 184 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 RAP1AP62834 184 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 TOP3AQ13472 1001 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-207ENST00000553290 GGTLC2Q14390 218 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 MSMPQ1L6U9 139 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 TBC1D28Q2M2D7 210 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 GLYATQ6IB77 296 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 SLC25A47Q6Q0C1 308 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 TMPRSS11FQ6ZWK6 438 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 HIPK1Q86Z02 1210 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 ZCCHC24Q8N2G6 241 aaKnown RBP11.15□□□□□ -0.62
ACTN1-207ENST00000553290 LRRC18Q8N456 261 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 LRRC75AQ8NAA5 344 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 FAM156AQ8NDB6 213 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 OR51A7Q8NH64 312 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 NMNAT1Q9HAN9 279 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-207ENST00000553290 ADA2Q9NZK5 511 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms