RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 IL1RAPQ9NPH3 570 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 SIGLEC7Q9Y286 467 aa16.68■□□□□ 0.26
PTCH1-227ENST00000553256 FN1P02751 2386 aaKnown RBP16.68■□□□□ 0.26
PTCH1-227ENST00000553256 NAV3Q8IVL0 2385 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 SH3PXD2BA1X283 911 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 SLC2A10O95528 541 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 CALB2P22676 271 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 ACVR1BP36896 505 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 MAGEA2P43356 314 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 CTXN1P60606 82 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 RAB1AP62820 205 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 MRPS34P82930 218 aaKnown RBP16.67■□□□□ 0.26
PTCH1-227ENST00000553256 MS4A2Q01362 244 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 FMODQ06828 376 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 PIGFQ07326 219 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 KRTAP1-1Q07627 177 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 TNK1Q13470 666 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 THSD4Q6ZMP0 1018 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 HDDC2Q7Z4H3 204 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 ZER1Q7Z7L7 766 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 BIVMQ86UB2 503 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 OAFQ86UD1 273 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 CYP4Z1Q86W10 505 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 IL17RDQ8NFM7 739 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 OR4K5Q8NGD3 323 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 NSMCE2Q96MF7 247 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 SH3GL3Q99963 347 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 TAS2R1Q9NYW7 299 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 ACTR3BQ9P1U1 418 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 STX18Q9P2W9 335 aaKnown RBP16.67■□□□□ 0.26
PTCH1-227ENST00000553256 RTTNQ86VV8 2226 aa16.67■□□□□ 0.26
PTCH1-227ENST00000553256 UBL3O95164 117 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 OR8G3PP0DMU2 310 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 SAGP10523 405 aaPredicted RBP16.66■□□□□ 0.26
PTCH1-227ENST00000553256 NR4A1P22736 598 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 THBS4P35443 961 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 CLRN1P58418 232 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 NPRL3Q12980 569 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 ZBED5Q49AG3 693 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 ARHGAP24Q8N264 748 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 ARIH2OSQ8N7S6 290 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 OR10H5Q8NGA6 315 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 FAM46AQ96IP4 442 aaKnown RBP16.66■□□□□ 0.26
PTCH1-227ENST00000553256 BDH2Q9BUT1 245 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 PLK3Q9H4B4 646 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 NRIP3Q9NQ35 241 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 ADAM18Q9Y3Q7 739 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 V9GYQ6 96 aa16.66■□□□□ 0.26
PTCH1-227ENST00000553256 MGRN1O60291 552 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 SERPINA5P05154 406 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 CD14P08571 375 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 CD79AP11912 226 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 SERPINF1P36955 418 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 HMGA2P52926 109 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 CLEC12BQ2HXU8 276 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 MESTQ5EB52 335 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 LCN8Q6JVE9 175 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 DOK1Q99704 481 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 C1orf21Q9H246 121 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 SIAEQ9HAT2 523 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 TMEM5Q9Y2B1 443 aa16.65■□□□□ 0.26
PTCH1-227ENST00000553256 SCG5P05408 212 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 OR4A8P0C604 315 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 ITGA2P17301 1181 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 CDAP32320 146 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 CAPZA2P47755 286 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 PTDSS1P48651 473 aaKnown RBP16.64■□□□□ 0.25
PTCH1-227ENST00000553256 ERVK-25P63136 954 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 TOP3AQ13472 1001 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-227ENST00000553256 RAB39AQ14964 217 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 THEM4Q5T1C6 240 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 FAM205BPQ63HN1 556 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 PAQR4Q8N4S7 273 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-227ENST00000553256 OR52J3Q8NH60 311 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 NANOS1Q8WY41 292 aaKnown RBP16.64■□□□□ 0.25
PTCH1-227ENST00000553256 Q96M85 177 aa16.64■□□□□ 0.25
PTCH1-227ENST00000553256 FAM32AQ9Y421 112 aaKnown RBP16.64■□□□□ 0.25
PTCH1-227ENST00000553256 B9A039 149 aa16.63■□□□□ 0.25
PTCH1-227ENST00000553256 ACOT8O14734 319 aa16.63■□□□□ 0.25
PTCH1-227ENST00000553256 GMNNO75496 209 aa16.63■□□□□ 0.25
PTCH1-227ENST00000553256 TXNDC12O95881 172 aa16.63■□□□□ 0.25
PTCH1-227ENST00000553256 TRIM25Q14258 630 aaKnown RBP16.63■□□□□ 0.25
PTCH1-227ENST00000553256 FAM27BQ5VT28 67 aa16.63■□□□□ 0.25
PTCH1-227ENST00000553256 DPPA2Q7Z7J5 298 aa16.63■□□□□ 0.25
PTCH1-227ENST00000553256 OR4C15Q8NGM1 316 aa16.63■□□□□ 0.25
PTCH1-227ENST00000553256 FBXO17Q96EF6 278 aa16.63■□□□□ 0.25
PTCH1-227ENST00000553256 BARX1Q9HBU1 254 aaPredicted RBP16.63■□□□□ 0.25
PTCH1-227ENST00000553256 FBXL3Q9UKT7 428 aa16.63■□□□□ 0.25
PTCH1-227ENST00000553256 SLC22A23A1A5C7 686 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 IMPA2O14732 288 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 GPRIN2O60269 458 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 LY6G6DO95868 133 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 FABP3P05413 133 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 HOXB4P17483 251 aaPredicted RBP16.62■□□□□ 0.25
PTCH1-227ENST00000553256 GSSP48637 474 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 ZNF84P51523 738 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 RIPPLY3P57055 190 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 FGD3Q5JSP0 725 aa16.62■□□□□ 0.25
PTCH1-227ENST00000553256 ZNF770Q6IQ21 691 aaPredicted RBP16.62■□□□□ 0.25
PTCH1-227ENST00000553256 PGM2L1Q6PCE3 622 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms