RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 NAAAQ02083 359 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 FMODQ06828 376 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 PIGFQ07326 219 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 KRR1Q13601 381 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 SLC36A2Q495M3 483 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 THEM4Q5T1C6 240 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 PGBD2Q6P3X8 592 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 DPY19L2P2Q6ZN68 376 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 DPPA2Q7Z7J5 298 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 CANT1Q8WVQ1 401 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 Q96M85 177 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 GPX7Q96SL4 187 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 GPA33Q99795 319 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 DHRS9Q9BPW9 319 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 KCNN2Q9H2S1 579 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 DENND2DQ9H6A0 471 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 IL20RAQ9UHF4 553 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 SLC7A8Q9UHI5 535 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 FBXL3Q9UKT7 428 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 MOKQ9UQ07 419 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 U3KQV3 271 aa16.09■□□□□ 0.17
PRPF40B-216ENST00000552301 ARID1AO14497 2285 aa16.08■□□□□ 0.17
PRPF40B-216ENST00000552301 TEX13CA0A0J9YWL9 993 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 H7C1C5 153 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 CST1P01037 141 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 ZNF26P17031 533 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 SDHAP31040 664 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 GIPRP48546 466 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 GSSP48637 474 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 ZNF133P52736 654 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 HMGA2P52926 109 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 LCN6P62502 163 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 TSPAN31Q12999 210 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 GK3PQ14409 553 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 NRN1LQ496H8 165 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 AGAP6Q5VW22 663 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 C1orf94Q6P1W5 598 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 TMEM53Q6P2H8 277 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 THSD4Q6ZMP0 1018 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 CCDC121Q6ZUS5 278 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 SLC16A14Q7RTX9 510 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 SKA3Q8IX90 412 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 FBXL14Q8N1E6 418 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 IL17RDQ8NFM7 739 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 OR9Q2Q8NGE9 314 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 OR52L1Q8NGH7 329 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 GTPBP3Q969Y2 492 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 OR52D1Q9H346 318 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 MMADHCQ9H3L0 296 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 RNF121Q9H920 327 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 NRIP3Q9NQ35 241 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 IER3IP1Q9Y5U9 82 aa16.08■□□□□ 0.16
PRPF40B-216ENST00000552301 ZNF503-AS2A6NEH8 195 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 E7EQL1 145 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 SOCS2O14508 198 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 MGRN1O60291 552 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 PPP1R3DO95685 299 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 CELA3BP08861 270 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 NPR2P20594 1047 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 ERFP50548 548 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 FABP6P51161 128 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 RAB1AP62820 205 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 MRPS34P82930 218 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 PPP1R8Q12972 351 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 RFX4Q33E94 735 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 MESTQ5EB52 335 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 RPL13AP3Q6NVV1 102 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 SLC25A47Q6Q0C1 308 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 B3GLCTQ6Y288 498 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 FAM122BQ7Z309 247 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 ADCK1Q86TW2 530 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 CLDN22Q8N7P3 220 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 AQP11Q8NBQ7 271 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 OR4C15Q8NGM1 316 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 HTRA1Q92743 480 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 RASD2Q96D21 266 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 NMD3Q96D46 503 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 SH3GL3Q99963 347 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 IFT27Q9BW83 186 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 LRMDAQ9H2I8 198 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 SEC61A2Q9H9S3 476 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 B3GNT2Q9NY97 397 aa16.07■□□□□ 0.16
PRPF40B-216ENST00000552301 A0A1W2PPL8 197 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 PRSS37A4D1T9 235 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 AHCYL1O43865 530 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 E2F6O75461 281 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 CIB2O75838 187 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 SOD3P08294 240 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 APEHP13798 732 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 NOS3P29474 1203 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 TESK1Q15569 626 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 SGCAQ16586 387 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 ZNF544Q6NX49 715 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 ZNF620Q6ZNG0 422 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 JAZF1Q86VZ6 243 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 LRRC18Q8N456 261 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 OR4F15Q8NGB8 312 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 PERPQ96FX8 193 aa16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 ERMAPQ96PL5 475 aaPredicted RBP16.06■□□□□ 0.16
PRPF40B-216ENST00000552301 CXXC4Q9H2H0 198 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms