RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ZNF71Q9NQZ8 489 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 SAR1AQ9NR31 198 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 CHRNA9Q9UGM1 479 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 VDAC3Q9Y277 283 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 MMACHCQ9Y4U1 282 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 CSAG2Q9Y5P2 127 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 SAGE2PA6NJ88 616 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 G3V3Y1 287 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 K7ENP7 123 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 OVOL3O00110 214 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 NDUFAB1O14561 156 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 SHOX2O60902 331 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 CLPSP04118 112 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 SLC35E2P0CK97 266 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 PRPS1L1P21108 318 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 S100A3P33764 101 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 POLR2JP52435 117 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 HBA1P69905 142 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 LY6DQ14210 128 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 CAPRIN1Q14444 709 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 PAGE3Q5JUK9 113 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 SLC25A24Q6NUK1 477 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 NIPAL1Q6NVV3 410 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 ANGPTL8Q6UXH0 198 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 NDUFAF7Q7L592 441 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 C9orf40Q8IXQ3 194 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 ST13P4Q8IZP2 240 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 FAM9CQ8IZT9 166 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 MAPKAPK5-AS1Q8N8E1 139 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 RELL2Q8NC24 303 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 APCDD1LQ8NCL9 501 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 NFAM1Q8NET5 270 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 FDCSPQ8NFU4 85 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 OR4A15Q8NGL6 344 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 GGHQ92820 318 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 DTNBP1Q96EV8 351 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 IMMP1LQ96LU5 166 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 OR52E6Q96RD3 313 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 ZBTB18Q99592 522 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 NPAS2Q99743 824 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 LAT2Q9GZY6 243 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 ZNF385DQ9H6B1 395 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 CLMPQ9H6B4 373 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 SDR39U1Q9NRG7 319 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 GPR83Q9NYM4 423 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 C19orf25Q9UFG5 118 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 ATP6V1HQ9UI12 483 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 NUP210LQ5VU65 1888 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 DOCK10Q96BY6 2186 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 TNRC6AQ8NDV7 1962 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 TMEM129A0AVI4 362 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 TMEM89A2RUT3 159 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 C17orf51A8MQB3 221 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 IGLV3-21P80748 117 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 SLC34A1Q06495 639 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 LIPKQ5VXJ0 399 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 MORN5Q5VZ52 161 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 KCTD8Q6ZWB6 473 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 KIRREL3Q8IZU9 778 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 B3GNT7Q8NFL0 401 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 OR4C15Q8NGM1 316 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 ZNF721Q8TF20 911 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 NEUROG1Q92886 237 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 TRIM4Q9C037 500 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 DDX18Q9NVP1 670 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 PSME2Q9UL46 239 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 PRRC2CQ9Y520 2896 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 IGSF10Q6WRI0 2623 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 COL6A6A6NMZ7 2263 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 SMG1Q96Q15 3661 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 SNURFLB1AK76 121 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 UPK1AO00322 258 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 FBP2O00757 339 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 SCN2BO60939 215 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 OR2J2O76002 312 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 HPP00738 406 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 IL10P22301 178 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 KCNK10P57789 538 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 SERTAD2Q14140 314 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 CCNJQ5T5M9 372 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 TNFAIP8L2Q6P589 184 aaPredicted RBP3.28□□□□□ -1.88
APAF1-208ENST00000549007 ZNF621Q6ZSS3 439 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 C10orf111Q8N326 155 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 OR5D16Q8NGK9 328 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 PSMF1Q92530 271 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 PIK3R3Q92569 461 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 RAB8BQ92930 207 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 HES7Q9BYE0 225 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 DEFB126Q9BYW3 111 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 CNOT2Q9NZN8 540 aaKnown RBP3.28□□□□□ -1.88
APAF1-208ENST00000549007 IL20RAQ9UHF4 553 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 KCNE3Q9Y6H6 103 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 RP1L1Q8IWN7 2480 aaPredicted RBP3.28□□□□□ -1.88
APAF1-208ENST00000549007 NPIPA5A0A0B4J1W7 369 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 B8ZZF3 427 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 NPIPA7E9PJI5 369 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 FAM107AO95990 144 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 IGHEP01854 428 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 IGKV3-11P04433 115 aa3.28□□□□□ -1.88
APAF1-208ENST00000549007 ATP1B1P05026 303 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms