RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 PPIAL4AQ9Y536 164 aa2.39□□□□□ -2.03
CNOT2-216ENST00000548939 HERC2O95714 4834 aa2.39□□□□□ -2.03
CNOT2-216ENST00000548939 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
CNOT2-216ENST00000548939 YLPM1P49750 1951 aaKnown RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 SNRNP200O75643 2136 aaKnown RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 A0A096LNT2 108 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 TRBV11-1A0A0K0K1C0 115 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 SLC5A10A0PJK1 596 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 A8MUA0 341 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 CCDC188H7C350 402 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 TRAPPC6AO75865 159 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 PDE5AO76074 875 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 P04436 131 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 CCDC159P0C7I6 412 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 SLC35E2P0CK97 266 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 DESP17661 470 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 CNR1P21554 472 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 CYLC1P35663 651 aaPredicted RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 UGT2B10P36537 528 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 XCR1P46094 333 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 FHITP49789 147 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 P2RY4P51582 365 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 SRYQ05066 204 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 PSG7Q13046 419 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 STK38Q15208 465 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 HKDC1Q2TB90 917 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 PAN3Q58A45 887 aaKnown RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 KRT80Q6KB66 452 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 FAM173BQ6P4H8 233 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 DNM1P46Q6ZS02 220 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 KIAA1328Q86T90 577 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 NPWQ8N729 165 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 CSNK1A1LQ8N752 337 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 TMEM99Q8N816 258 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 KIR2DL5BQ8NHK3 375 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 JOSD2Q8TAC2 188 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 NEIL3Q8TAT5 605 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 RAB3IL1Q8TBN0 382 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 MCOLN3Q8TDD5 553 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 TSLPQ969D9 159 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 UCN3Q969E3 161 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 RERGQ96A58 199 aaPredicted RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 DCUN1D1Q96GG9 259 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 VPS35Q96QK1 796 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 OR5M11Q96RB7 305 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 TSG101Q99816 390 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 CCDC77Q9BR77 488 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 NUDT16L1Q9BRJ7 211 aaKnown RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 SFXN3Q9BWM7 321 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 CACNG6Q9BXT2 260 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 CHRNA10Q9GZZ6 450 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 DRC3Q9H069 523 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 OPN3Q9H1Y3 402 aaPredicted RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 TRIM45Q9H8W5 580 aaPredicted RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 VIPAS39Q9H9C1 493 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 LIN28AQ9H9Z2 209 aaKnown RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 MAGEF1Q9HAY2 307 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 IL1RL2Q9HB29 575 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 ELL3Q9HB65 397 aaPredicted RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 ADAP2Q9NPF8 381 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 HOMER3Q9NSC5 361 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 DDX28Q9NUL7 540 aaKnown RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 FAIMQ9NVQ4 179 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 IMPAD1Q9NX62 359 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 SACSQ9NZJ4 4579 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 AIPL1Q9NZN9 384 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 RAI1Q7Z5J4 1906 aaPredicted RBP2.38□□□□□ -2.03
CNOT2-216ENST00000548939 DNAH1Q9P2D7 4330 aa2.38□□□□□ -2.03
CNOT2-216ENST00000548939 GLYATL1P3A0A0U1RQE8 302 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 GOLGA6L4A6NEF3 574 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 A8MXE2 369 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 TRIM49D1C9J1S8 452 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 G3V4G9 280 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 H0YGG7 62 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 WWP2O00308 870 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 UBE2CO00762 179 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 PRPSAP2O60256 369 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 VPS26AO75436 327 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 OR2J2O76002 312 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 LY6HO94772 140 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 GLSO94925 669 aaPredicted RBP2.37□□□□□ -2.03
CNOT2-216ENST00000548939 DUSP14O95147 198 aaKnown RBP2.37□□□□□ -2.03
CNOT2-216ENST00000548939 FREM3P0C091 2139 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 PNMA6AP0CW24 399 aaPredicted RBP2.37□□□□□ -2.03
CNOT2-216ENST00000548939 RALBP11234 206 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 CYP11B1P15538 503 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 PCMT1P22061 227 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 ACKR3P25106 362 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 LOXP28300 417 aaPredicted RBP2.37□□□□□ -2.03
CNOT2-216ENST00000548939 PTPN6P29350 595 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 PEBP1P30086 187 aaKnown RBP2.37□□□□□ -2.03
CNOT2-216ENST00000548939 SLC26A3P40879 764 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 CD86P42081 329 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 CDH6P55285 790 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 RPL26P61254 145 aaKnown RBP2.37□□□□□ -2.03
CNOT2-216ENST00000548939 GNB2P62879 340 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 GPR50Q13585 617 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 TSTA3Q13630 321 aaPredicted RBP2.37□□□□□ -2.03
CNOT2-216ENST00000548939 PTK6Q13882 451 aa2.37□□□□□ -2.03
CNOT2-216ENST00000548939 ZNF273Q14593 569 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms