RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 LINC00304Q8N9R0 145 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 STEAP2Q8NFT2 490 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 OR52P1PQ8NH57 321 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 ZCCHC13Q8WW36 166 aaKnown RBP1.63□□□□□ -2.15
CCDC38-206ENST00000548771 STMN2Q93045 179 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 LRRC58Q96CX6 371 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 PLEKHA8Q96JA3 519 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 IFT74Q96LB3 600 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 CNN2Q99439 309 aaKnown RBP1.63□□□□□ -2.15
CCDC38-206ENST00000548771 FMO2Q99518 471 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 CDX2Q99626 313 aaPredicted RBP1.63□□□□□ -2.15
CCDC38-206ENST00000548771 TMEM59Q9BXS4 323 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 LINC00597Q9H2U6 94 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 SHPKQ9UHJ6 478 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 CLEC4AQ9UMR7 237 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 PIGLQ9Y2B2 252 aa1.63□□□□□ -2.15
CCDC38-206ENST00000548771 HIDE1A8MVS5 230 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 CCL21O00585 134 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 TSPAN12O95859 305 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 IGHV2-5P01817 119 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 ADRA2AP08913 450 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 EPS15P42566 896 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 NAMPTP43490 491 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 IMMTQ16891 758 aaKnown RBP1.62□□□□□ -2.15
CCDC38-206ENST00000548771 VAX1Q5SQQ9 334 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 DNLZQ5SXM8 178 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 OR2A2Q6IF42 318 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 SHISA6Q6ZSJ9 500 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 ABHD13Q7L211 337 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 OAFQ86UD1 273 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 RIMKLAQ8IXN7 391 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 TRPV1Q8NER1 839 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 OR1L4Q8NGR5 311 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 TM4SF18Q96CE8 201 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 WFIKKN1Q96NZ8 548 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 PSKH2Q96QS6 385 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 SH3GL3Q99963 347 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 SLC39A3Q9BRY0 314 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 FAIM2Q9BWQ8 316 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 MFFQ9GZY8 342 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 VCX2Q9H322 139 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 RPP21Q9H633 154 aaKnown RBP1.62□□□□□ -2.15
CCDC38-206ENST00000548771 RPF2Q9H7B2 306 aaKnown RBP1.62□□□□□ -2.15
CCDC38-206ENST00000548771 NIPAL2Q9H841 368 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 CDHR2Q9BYE9 1310 aa1.62□□□□□ -2.15
CCDC38-206ENST00000548771 CENPJQ9HC77 1338 aaPredicted RBP1.62□□□□□ -2.15
CCDC38-206ENST00000548771 A0A1B0GVX0 72 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 BTBD17A6NE02 478 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 SNTNA6NMZ2 147 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 ZNF726A6NNF4 738 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 H0YHG0 523 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 HAS3O00219 553 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 DYNC1I1O14576 645 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 GOSR2O14653 212 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 SOX15O60248 233 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 SRP72O76094 671 aaKnown RBP1.61□□□□□ -2.15
CCDC38-206ENST00000548771 IGHV1-8P0DP01 117 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 FOLR1P15328 257 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 GLRA2P23416 452 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 SERPINB5P36952 375 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 ZNF92Q03936 586 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 TCP10Q12799 353 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 PON3Q15166 354 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 COX19Q49B96 90 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 LRRC23Q53EV4 343 aaPredicted RBP1.61□□□□□ -2.15
CCDC38-206ENST00000548771 BIVMQ86UB2 503 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 LHFPL3Q86UP9 236 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 CALHM3Q86XJ0 350 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 TGIF2LXQ8IUE1 241 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 STPG2Q8N412 459 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 ZNF461Q8TAF7 563 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 ESR2Q92731 530 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 FAM3DQ96BQ1 224 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 RBMXL1Q96E39 390 aaKnown RBP1.61□□□□□ -2.15
CCDC38-206ENST00000548771 OR10C1Q96KK4 312 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 TSGA13Q96PP4 275 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 P2RX4Q99571 388 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 CCT7Q99832 543 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 CHAC1Q9BUX1 264 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 MRPL37Q9BZE1 423 aaKnown RBP1.61□□□□□ -2.15
CCDC38-206ENST00000548771 ANKRD19PQ9H560 264 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 GORASP2Q9H8Y8 452 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 ISYNA1Q9NPH2 558 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 ZNF355PQ9NSJ1 428 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 ZNRD1Q9P1U0 126 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 BLOC1S6Q9UL45 172 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 TMEM14AQ9Y6G1 99 aa1.61□□□□□ -2.15
CCDC38-206ENST00000548771 IGHV3-74A0A0B4J1X5 117 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 IGHV5-10-1A0A0J9YXX1 117 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 PPP1R2P9O14990 202 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 RAD51BO15315 384 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 RBFOX2O43251 390 aaKnown RBP eCLIP1.6□□□□□ -2.15
CCDC38-206ENST00000548771 PSTPIP1O43586 416 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 EIF3GO75821 320 aaKnown RBP eCLIP1.6□□□□□ -2.15
CCDC38-206ENST00000548771 HLA-DPB1P04440 258 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 ATP1B2P14415 290 aaPredicted RBP1.6□□□□□ -2.15
CCDC38-206ENST00000548771 PRPHP41219 470 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 CDKN1BP46527 198 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 CEBPDP49716 269 aaPredicted RBP1.6□□□□□ -2.15
CCDC38-206ENST00000548771 AIF1P55008 147 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms