RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CCNL2Q96S94 520 aaPredicted RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 MRPL45Q9BRJ2 306 aaKnown RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 SPATA16Q9BXB7 569 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 NXF5Q9H1B4 397 aaKnown RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 EHD1Q9H4M9 534 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 PRORYQ9H606 182 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 SGK2Q9HBY8 427 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 SLC17A5Q9NRA2 495 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 NMRK1Q9NWW6 199 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 IL36GQ9NZH8 169 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 C6orf203Q9P0P8 240 aaPredicted RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 SUN2Q9UH99 717 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 SCML1Q9UN30 329 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 KMT2BQ9UMN6 2715 aaPredicted RBP2.92□□□□□ -1.94
PTCH1-216ENST00000548379 DENND4AQ7Z401 1863 aa2.92□□□□□ -1.94
PTCH1-216ENST00000548379 BRWD1Q9NSI6 2320 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 EPG5Q9HCE0 2579 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 TRAV26-1A0A087WT03 109 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 A0A1B0GTQ1 180 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 ZFP92A6NM28 416 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 E7ENQ6 273 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 HCRTR1O43613 425 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 CXCL13O43927 109 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 KLHL41O60662 606 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 LRATO95237 230 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 LYPD3O95274 346 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 LALBAP00709 142 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 IGKV3-15P01624 115 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 IGLV3-19P01714 112 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 IGHV3-48P01763 117 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 CISD3P0C7P0 127 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 POLR2EP19388 210 aaKnown RBP2.91□□□□□ -1.94
PTCH1-216ENST00000548379 IMPDH1P20839 514 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 GRIA1P42261 906 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 MAP3K7CLP57077 242 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 SNRPFP62306 86 aaKnown RBP2.91□□□□□ -1.94
PTCH1-216ENST00000548379 PDK3Q15120 406 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 SNRNP35Q16560 246 aaKnown RBP2.91□□□□□ -1.94
PTCH1-216ENST00000548379 C1orf220Q5T0J3 134 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 KDM7AQ6ZMT4 941 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 CDH26Q8IXH8 852 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 SPAG16Q8N0X2 631 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 OR2L13Q8N349 312 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 EID2Q8N6I1 236 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 EIF1ADQ8N9N8 165 aaKnown RBP2.91□□□□□ -1.94
PTCH1-216ENST00000548379 OR5B17Q8NGF7 314 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 OR56B2PQ8NGI1 322 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 OR13C2Q8NGS9 318 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF564Q8TBZ8 553 aaPredicted RBP2.91□□□□□ -1.94
PTCH1-216ENST00000548379 SLC2A14Q8TDB8 520 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF578Q96N58 590 aaPredicted RBP2.91□□□□□ -1.94
PTCH1-216ENST00000548379 IL4I1Q96RQ9 567 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 LRRN3Q9H3W5 708 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 LRRC40Q9H9A6 602 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 DCDC2Q9UHG0 476 aa2.91□□□□□ -1.94
PTCH1-216ENST00000548379 GPR179Q6PRD1 2367 aa2.9□□□□□ -1.94
PTCH1-216ENST00000548379 LOXHD1Q8IVV2 1947 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 ZNF292O60281 2723 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 FAM92AA1XBS5 289 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 XKRY2A2RUG3 117 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 E7ESA3 106 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 TNFSF11O14788 317 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 HCN1O60741 890 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 ZDHHC11BP0C7U3 371 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 CCDC166P0CW27 439 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 RNH1P13489 461 aaKnown RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 CALB2P22676 271 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 NUDT1P36639 197 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 TAGLN2P37802 199 aaKnown RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 MAP3K8P41279 467 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 DUSP3P51452 185 aaPredicted RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 EFNB2P52799 333 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 MYL6P60660 151 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 CHRNB3Q05901 458 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 BCL2L1Q07817 233 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 DNAJC3Q13217 504 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 DDX39BQ13838 428 aaKnown RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 EXOC3L2Q2M3D2 409 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 SFT2D3Q587I9 215 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 RSBN1Q5VWQ0 802 aaPredicted RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 KCNIP4Q6PIL6 250 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 WDR74Q6RFH5 385 aaPredicted RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 SCARA5Q6ZMJ2 495 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 UNC93AQ86WB7 457 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 OR56B4Q8NH76 319 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 TCTEX1D2Q8WW35 142 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 TMA16Q96EY4 203 aaKnown RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 MED8Q96G25 268 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 SECISBP2Q96T21 854 aaKnown RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 ZBTB18Q99592 522 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 CCT7Q99832 543 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 KLHDC3Q9BQ90 382 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 CSNK1G1Q9HCP0 422 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 NANSQ9NR45 359 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 AGPAT3Q9NRZ7 376 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 FAM49BQ9NUQ9 324 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 FBXL12Q9NXK8 326 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 IL37Q9NZH6 218 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 PHF11Q9UIL8 331 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 GGA2Q9UJY4 613 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms