RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 TLN2Q9Y4G6 2542 aa13.78□□□□□ -0.2
DDX54-204ENST00000546898 A6NIZ1 184 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 VSTM5A8MXK1 200 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 B9A039 149 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 CDC42EP2O14613 210 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 FABP3P05413 133 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 MSX2P35548 267 aaPredicted RBP13.77□□□□□ -0.21
DDX54-204ENST00000546898 ACVR1BP36896 505 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 LIMS1P48059 325 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 RAP1BP61224 184 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 SNRPD2P62316 118 aaKnown RBP13.77□□□□□ -0.21
DDX54-204ENST00000546898 RAP1AP62834 184 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 MRPS34P82930 218 aaKnown RBP13.77□□□□□ -0.21
DDX54-204ENST00000546898 HGFACQ04756 655 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 PIGFQ07326 219 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 CD47Q08722 323 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 RAB35Q15286 201 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 EFNB3Q15768 340 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 SWI5Q1ZZU3 235 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 SLC36A2Q495M3 483 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 ZBED5Q49AG3 693 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 TMEM53Q6P2H8 277 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 DNM1P46Q6ZS02 220 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 MEX3DQ86XN8 651 aaKnown RBP13.77□□□□□ -0.21
DDX54-204ENST00000546898 OR4K5Q8NGD3 323 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 ZNF519Q8TB69 540 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 FBXO17Q96EF6 278 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 FAM46AQ96IP4 442 aaKnown RBP13.77□□□□□ -0.21
DDX54-204ENST00000546898 TSPAN32Q96QS1 320 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 C1orf198Q9H425 327 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 ACTR3BQ9P1U1 418 aa13.77□□□□□ -0.21
DDX54-204ENST00000546898 GDF2Q9UK05 429 aaPredicted RBP13.77□□□□□ -0.21
DDX54-204ENST00000546898 CR1P17927 2039 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 CHD3Q12873 2000 aaKnown RBP13.76□□□□□ -0.21
DDX54-204ENST00000546898 TRBV4-1A0A0J9YWV2 114 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 NDUFS7O75251 213 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 DIRAS1O95057 198 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 GADD45GO95257 159 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 SLC2A10O95528 541 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 CD14P08571 375 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 NPR2P20594 1047 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 RPL4P36578 427 aaKnown RBP13.76□□□□□ -0.21
DDX54-204ENST00000546898 SERPINF1P36955 418 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 NUDT6P53370 316 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 SPIBQ01892 262 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 SNTB2Q13425 540 aaKnown RBP13.76□□□□□ -0.21
DDX54-204ENST00000546898 DAG1Q14118 895 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 ADIPOQQ15848 244 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 MST1LQ2TV78 715 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 THEM4Q5T1C6 240 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 SLC16A14Q7RTX9 510 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 IGFN1Q86VF2 1251 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 ARIH2OSQ8N7S6 290 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 MS4A3Q96HJ5 214 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 RBP7Q96R05 134 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 SH3GL3Q99963 347 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 FUZQ9BT04 418 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 SIAEQ9HAT2 523 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 IL1RAPQ9NPH3 570 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 PRPF19Q9UMS4 504 aaKnown RBP13.76□□□□□ -0.21
DDX54-204ENST00000546898 AURKCQ9UQB9 309 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 SIGLEC7Q9Y286 467 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 SPEF1Q9Y4P9 236 aa13.76□□□□□ -0.21
DDX54-204ENST00000546898 SH3PXD2BA1X283 911 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 NDUFB2O95178 105 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 SERPINA5P05154 406 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 OR4A8P0C604 315 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 ZNF35P13682 527 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 NR4A1P22736 598 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 OMPP47874 163 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 RPS23P62266 143 aaKnown RBP13.75□□□□□ -0.21
DDX54-204ENST00000546898 FMODQ06828 376 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 TNK1Q13470 666 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 RAB39AQ14964 217 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 SEC23BQ15437 767 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 SLC25A47Q6Q0C1 308 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 VHLLQ6RSH7 139 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 CIARTQ8N365 385 aaPredicted RBP13.75□□□□□ -0.21
DDX54-204ENST00000546898 FGFBP3Q8TAT2 258 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 POP5Q969H6 163 aaKnown RBP13.75□□□□□ -0.21
DDX54-204ENST00000546898 RSRC1Q96IZ7 334 aaKnown RBP13.75□□□□□ -0.21
DDX54-204ENST00000546898 GPX7Q96SL4 187 aaPredicted RBP13.75□□□□□ -0.21
DDX54-204ENST00000546898 C1orf21Q9H246 121 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 KCNN2Q9H2S1 579 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 GSX1Q9H4S2 264 aaPredicted RBP13.75□□□□□ -0.21
DDX54-204ENST00000546898 GRHPRQ9UBQ7 328 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 UGT2A1Q9Y4X1 527 aa13.75□□□□□ -0.21
DDX54-204ENST00000546898 AHCYL1O43865 530 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 SSX4O60224 188 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 PTP4A3O75365 173 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 PTHP01270 115 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 HEXAP06865 529 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 PATE4P0C8F1 98 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 ATP6V1B2P21281 511 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 THBS4P35443 961 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 PPOXP50336 477 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 EFNA4P52798 201 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 DSCR9P59020 149 aa13.74□□□□□ -0.21
DDX54-204ENST00000546898 ERVK-25P63136 954 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms