RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 WDR12Q9GZL7 423 aaKnown RBP10.7□□□□□ -0.7
CCDC38-202ENST00000546386 ELOVL3Q9HB03 270 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 B3GAT1Q9P2W7 334 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 DKKL1Q9UK85 242 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 NXT1Q9UKK6 140 aaKnown RBP10.7□□□□□ -0.7
CCDC38-202ENST00000546386 PPIEQ9UNP9 301 aaKnown RBP10.7□□□□□ -0.7
CCDC38-202ENST00000546386 CMAHPQ9Y471 501 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 TRDV1A0A1B0GX56 115 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 PIN1P1O15428 100 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 ZIC3O60481 467 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 DKK1O94907 266 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 ITGB2P05107 769 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 CD97P48960 835 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 RAB25P57735 213 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 MFGE8Q08431 387 aaPredicted RBP10.7□□□□□ -0.7
CCDC38-202ENST00000546386 C9orf135Q5VTT2 229 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 CNIH2Q6PI25 160 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 ZNF227Q86WZ6 799 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 PSMF1Q92530 271 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 SLC7A6Q92536 515 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 SLC35B4Q969S0 331 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 ZNF385AQ96PM9 386 aaKnown RBP10.7□□□□□ -0.7
CCDC38-202ENST00000546386 ATF6BQ99941 703 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 TXNIPQ9H3M7 391 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 PTGES2Q9H7Z7 377 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 SDHAF3Q9NRP4 125 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 V9GYH0 126 aa10.7□□□□□ -0.7
CCDC38-202ENST00000546386 TP53I11O14683 189 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 UPK1BO75841 260 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 ELK1P19419 428 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 SPINK2P20155 84 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 GALK2Q01415 458 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 PLA2G7Q13093 441 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 EIF2B1Q14232 305 aaKnown RBP10.69□□□□□ -0.7
CCDC38-202ENST00000546386 CDK5R1Q15078 307 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 ZSWIM7Q19AV6 140 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 TMEM44Q2T9K0 475 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 RNLSQ5VYX0 342 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 DMKNQ6E0U4 476 aaPredicted RBP10.69□□□□□ -0.7
CCDC38-202ENST00000546386 ASB18Q6ZVZ8 466 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 DCXRQ7Z4W1 244 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 CELF2-AS1Q8N7Q2 184 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 TTC9Q92623 222 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 CCDC59Q9P031 241 aaKnown RBP10.69□□□□□ -0.7
CCDC38-202ENST00000546386 LRFN1Q9P244 771 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 TLN1Q9Y490 2541 aaKnown RBP10.69□□□□□ -0.7
CCDC38-202ENST00000546386 MYO7BQ6PIF6 2116 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 A0A0G2JMP0 313 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 A0A0X1KG70 313 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 NKX2-8O15522 239 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 PLPP2O43688 288 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 PATE4P0C8F1 98 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 APOBEC1P41238 236 aaKnown RBP10.69□□□□□ -0.7
CCDC38-202ENST00000546386 RANBP1P43487 201 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 CLDN17P56750 224 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 MLF1P58340 268 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 TCF15Q12870 199 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 ARMC4Q5T2S8 1044 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 CD200R1LQ6Q8B3 271 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 PRSS45Q7RTY3 260 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 CCDC190Q86UF4 302 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 PRSS35Q8N3Z0 413 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 OR4M2Q8NGB6 313 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 ZNF519Q8TB69 540 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 ZNF845Q96IR2 970 aaPredicted RBP10.69□□□□□ -0.7
CCDC38-202ENST00000546386 GPX7Q96SL4 187 aaPredicted RBP10.69□□□□□ -0.7
CCDC38-202ENST00000546386 BCL7BQ9BQE9 202 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 SOX7Q9BT81 388 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 MMP28Q9H239 520 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 PEX16Q9Y5Y5 336 aa10.69□□□□□ -0.7
CCDC38-202ENST00000546386 ARGFXA6NJG6 315 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 B4E171 279 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 OR2T1O43869 369 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 EIF4EP06730 217 aaKnown RBP10.68□□□□□ -0.7
CCDC38-202ENST00000546386 ALOX5APP20292 161 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 NTF4P34130 210 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 CD96P40200 585 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 TSPAN7P41732 249 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 GABREP78334 506 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 EXT1Q16394 746 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 C3orf33Q6P1S2 294 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 OPN5Q6U736 354 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 ZNF676Q8N7Q3 588 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 S100ZQ8WXG8 99 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 SMIM19Q96E16 107 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 CYYR1Q96J86 154 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 ZFP3Q96NJ6 502 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 ABHD6Q9BV23 337 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 CHST11Q9NPF2 352 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 HAO2Q9NYQ3 351 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 MRPL15Q9P015 296 aaKnown RBP10.68□□□□□ -0.7
CCDC38-202ENST00000546386 EMC9Q9Y3B6 208 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 PCDHGA5Q9Y5G8 931 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 COL5A1P20908 1838 aaPredicted RBP10.68□□□□□ -0.7
CCDC38-202ENST00000546386 TRAV8-7A0A075B6U6 113 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 A0A0J9YW62 118 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 A0A1W2PQ09 198 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 UPK3AO75631 287 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 IL1AP01583 271 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 FTH1P19P0C7X4 201 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms