RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 IDH3BO43837 385 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 TXNDC12O95881 172 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 HLA-HP01893 362 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 PRKACGP22612 351 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 CD40P25942 277 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 LOXP28300 417 aaPredicted RBP14.69□□□□□ -0.06
LTBR-215ENST00000546296 PIGFQ07326 219 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 SGCAQ16586 387 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 MESTQ5EB52 335 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 C10orf128Q5T292 105 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 SHQ1Q6PI26 577 aaKnown RBP14.69□□□□□ -0.06
LTBR-215ENST00000546296 SLC25A47Q6Q0C1 308 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 ZNF704Q6ZNC4 412 aaPredicted RBP14.69□□□□□ -0.06
LTBR-215ENST00000546296 ZNF627Q7L945 461 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 ADCK1Q86TW2 530 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 HS3ST5Q8IZT8 346 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 DEPDC4Q8N2C3 294 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 ATG16L2Q8NAA4 619 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 PYDC1Q8WXC3 89 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 NMD3Q96D46 503 aaKnown RBP14.69□□□□□ -0.06
LTBR-215ENST00000546296 NRBF2Q96F24 287 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 SH3GL3Q99963 347 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 NIPSNAP1Q9BPW8 284 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 RERGLQ9H628 205 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 DENND2DQ9H6A0 471 aaPredicted RBP14.69□□□□□ -0.06
LTBR-215ENST00000546296 SEC61A2Q9H9S3 476 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 UBTD1Q9HAC8 227 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 NTN4Q9HB63 628 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 KIF17Q9P2E2 1029 aa14.69□□□□□ -0.06
LTBR-215ENST00000546296 NOTCH2Q04721 2471 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 H3BN98 237 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 ABCD4O14678 606 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 ARPC3O15145 178 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 SOX14O95416 240 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 PLAUP00749 431 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 IGFBP1P08833 259 aaPredicted RBP14.68□□□□□ -0.06
LTBR-215ENST00000546296 ANXA8P13928 327 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 CBR1P16152 277 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 NPR2P20594 1047 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 CDAP32320 146 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 ZNF133P52736 654 aaPredicted RBP14.68□□□□□ -0.06
LTBR-215ENST00000546296 SLC35F1Q5T1Q4 408 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 CD300LDQ6UXZ3 194 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 AMIGO2Q86SJ2 522 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 MDP1Q86V88 176 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 SKA3Q8IX90 412 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 PIAS4Q8N2W9 510 aaPredicted RBP14.68□□□□□ -0.06
LTBR-215ENST00000546296 OR5K1Q8NHB7 308 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 LRTOMTQ8WZ04 291 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 NRGNQ92686 78 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 HTRA1Q92743 480 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 SLC38A2Q96QD8 506 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 KCNS3Q9BQ31 491 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 TSSK6Q9BXA6 273 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 KCNN2Q9H2S1 579 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 PLEKHF2Q9H8W4 249 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 RNF121Q9H920 327 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 IL20Q9NYY1 176 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 ALPK2Q86TB3 2170 aa14.68□□□□□ -0.06
LTBR-215ENST00000546296 IGKV1D-43A0A0B4J1Z2 117 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 A0A1W2PPL8 197 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 A0A1W2PPR1 153 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 SLC16A7O60669 478 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 UBL3O95164 117 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 RENP00797 406 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 POU1F1P28069 291 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 ARR3P36575 388 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 CDKN2AP42771 156 aaKnown RBP14.67□□□□□ -0.06
LTBR-215ENST00000546296 MRPS34P82930 218 aaKnown RBP14.67□□□□□ -0.06
LTBR-215ENST00000546296 NPRL3Q12980 569 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 ZSCAN26Q16670 478 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 GSG1Q2KHT4 349 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 ADAM5Q6NVV9 412 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 ZFP1Q6P2D0 407 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 LEG1Q6P5S2 330 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 SLC22A25Q6T423 547 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 SLC16A14Q7RTX9 510 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 HIPK1Q86Z02 1210 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 LRRC18Q8N456 261 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 OR4K13Q8NH42 304 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 TEX47Q8TBZ9 253 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 AKAP1Q92667 903 aaKnown RBP eCLIP14.67□□□□□ -0.06
LTBR-215ENST00000546296 RADILQ96JH8 1075 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 TMEM204Q9BSN7 226 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 PLA2G12AQ9BZM1 189 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 SYT4Q9H2B2 425 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 SIAEQ9HAT2 523 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 VSX1Q9NZR4 365 aaPredicted RBP14.67□□□□□ -0.06
LTBR-215ENST00000546296 POU2F3Q9UKI9 436 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 UGT2A1Q9Y4X1 527 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 CACNA1DQ01668 2161 aa14.67□□□□□ -0.06
LTBR-215ENST00000546296 HRNRQ86YZ3 2850 aaPredicted RBP14.66□□□□□ -0.06
LTBR-215ENST00000546296 IGHV1-18A0A0C4DH31 117 aa14.66□□□□□ -0.06
LTBR-215ENST00000546296 G3V2T6 193 aa14.66□□□□□ -0.06
LTBR-215ENST00000546296 MGRN1O60291 552 aa14.66□□□□□ -0.06
LTBR-215ENST00000546296 KHDRBS3O75525 346 aaKnown RBP14.66□□□□□ -0.06
LTBR-215ENST00000546296 RAB36O95755 333 aa14.66□□□□□ -0.06
LTBR-215ENST00000546296 PATE4P0C8F1 98 aa14.66□□□□□ -0.06
LTBR-215ENST00000546296 HIST1H1CP16403 213 aaKnown RBP14.66□□□□□ -0.06
LTBR-215ENST00000546296 ZNF23P17027 643 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms