RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 A6NIZ1 184 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 PDE5AO76074 875 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 FARS2O95363 451 aaKnown RBP10.3□□□□□ -0.76
YBX3-217ENST00000546164 CD14P08571 375 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 CELA3BP08861 270 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 ZNF14P17017 642 aaPredicted RBP10.3□□□□□ -0.76
YBX3-217ENST00000546164 ZNF26P17031 533 aaPredicted RBP10.3□□□□□ -0.76
YBX3-217ENST00000546164 CALCRP30988 508 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 FABP6P51161 128 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 ZNF84P51523 738 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 RAP1BP61224 184 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 RAB1AP62820 205 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 RAP1AP62834 184 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 FAM122BQ7Z309 247 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 YTHDF3Q7Z739 585 aaKnown RBP10.3□□□□□ -0.76
YBX3-217ENST00000546164 SKA3Q8IX90 412 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 ARIH2OSQ8N7S6 290 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 ASB9Q96DX5 294 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 FAM46AQ96IP4 442 aaKnown RBP10.3□□□□□ -0.76
YBX3-217ENST00000546164 TSPAN32Q96QS1 320 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 NDEL1Q9GZM8 345 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 MAGIXQ9H6Y5 334 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 ZNF442Q9H7R0 627 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 CA10Q9NS85 328 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 SIGLEC7Q9Y286 467 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 UGT2A1Q9Y4X1 527 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 ZFHX3Q15911 3703 aa10.3□□□□□ -0.76
YBX3-217ENST00000546164 ZANQ9Y493 2812 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 TLN2Q9Y4G6 2542 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 H7C417 338 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 AHCYL1O43865 530 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 KRT36O76013 467 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 NDUFB2O95178 105 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 GADD45GO95257 159 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 RAB36O95755 333 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 CD79AP11912 226 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 NPR2P20594 1047 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 ACVR1BP36896 505 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 CDKN1AP38936 164 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 GIPRP48546 466 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 HMGA2P52926 109 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 MRPS34P82930 218 aaKnown RBP10.29□□□□□ -0.76
YBX3-217ENST00000546164 MYBPC1Q00872 1141 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 MS4A2Q01362 244 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 SPIBQ01892 262 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 HGFACQ04756 655 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 CD47Q08722 323 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 NPRL3Q12980 569 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 TOP3AQ13472 1001 aaPredicted RBP10.29□□□□□ -0.76
YBX3-217ENST00000546164 SWI5Q1ZZU3 235 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 THEM4Q5T1C6 240 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 SLC25A47Q6Q0C1 308 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 CYP2R1Q6VVX0 501 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 FOXL2NBQ6ZUU3 175 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 ZER1Q7Z7L7 766 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 IGFN1Q86VF2 1251 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 DHFR2Q86XF0 187 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 ZDHHC21Q8IVQ6 265 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 OR52J3Q8NH60 311 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 FGFBP3Q8TAT2 258 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 RSRC1Q96IZ7 334 aaKnown RBP10.29□□□□□ -0.76
YBX3-217ENST00000546164 RBP7Q96R05 134 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 GPA33Q99795 319 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 SIAEQ9HAT2 523 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 BARX1Q9HBU1 254 aaPredicted RBP10.29□□□□□ -0.76
YBX3-217ENST00000546164 NRIP3Q9NQ35 241 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 AURKCQ9UQB9 309 aa10.29□□□□□ -0.76
YBX3-217ENST00000546164 CSPG4Q6UVK1 2322 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 NF1P21359 2839 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 IGKV1D-43A0A0B4J1Z2 117 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 UNC119BA6NIH7 251 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 UBOX5O94941 541 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 SLC2A10O95528 541 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 IGHV4-39P01824 125 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 SERPINA5P05154 406 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 BMP4P12644 408 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 ZNF35P13682 527 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 APEHP13798 732 aaKnown RBP10.28□□□□□ -0.76
YBX3-217ENST00000546164 FPR3P25089 353 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 RRM2P31350 389 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 RPL4P36578 427 aaKnown RBP10.28□□□□□ -0.76
YBX3-217ENST00000546164 IFNGR2P38484 337 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 PTDSS1P48651 473 aaKnown RBP10.28□□□□□ -0.76
YBX3-217ENST00000546164 FXYD6P3P58550 94 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 ERVK-25P63136 954 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 CHRNB3Q05901 458 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 FMODQ06828 376 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 PIGFQ07326 219 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 EFNB3Q15768 340 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 MST1LQ2TV78 715 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 SLC36A2Q495M3 483 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 DNAL1Q4LDG9 190 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 GPR139Q6DWJ6 353 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 DNM1P46Q6ZS02 220 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 NABP1Q96AH0 204 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 C18orf12Q96KH6 178 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 COX4I2Q96KJ9 171 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 Q96MF0 132 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 SH3GL3Q99963 347 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 CACNG6Q9BXT2 260 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms