RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 POU5F2Q8N7G0 328 aa17.11■□□□□ 0.33
CHD4-213ENST00000545584 OR1J2Q8NGS2 313 aa17.11■□□□□ 0.33
CHD4-213ENST00000545584 PRRC1Q96M27 445 aa17.11■□□□□ 0.33
CHD4-213ENST00000545584 MRPL13Q9BYD1 178 aaKnown RBP17.11■□□□□ 0.33
CHD4-213ENST00000545584 CCDC134Q9H6E4 229 aa17.11■□□□□ 0.33
CHD4-213ENST00000545584 ARMCX1Q9P291 453 aa17.11■□□□□ 0.33
CHD4-213ENST00000545584 DUSP13Q9UII6 198 aa17.11■□□□□ 0.33
CHD4-213ENST00000545584 ZNF346Q9UL40 294 aaKnown RBP17.11■□□□□ 0.33
CHD4-213ENST00000545584 IQCMA0A1B0GVH7 501 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 A0A1W2PPW3 197 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 RNF212BA8MTL3 300 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 TGFAP01135 160 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 IGFBP1P08833 259 aaPredicted RBP17.1■□□□□ 0.33
CHD4-213ENST00000545584 HNF1AP20823 631 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 MSMPQ1L6U9 139 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 TBC1D28Q2M2D7 210 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 RGS7BPQ6MZT1 257 aaPredicted RBP17.1■□□□□ 0.33
CHD4-213ENST00000545584 RBM15BQ8NDT2 890 aaKnown RBP17.1■□□□□ 0.33
CHD4-213ENST00000545584 MOSPD2Q8NHP6 518 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 SEPHS2Q99611 448 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 GPR160Q9UJ42 338 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 FZR1Q9UM11 496 aa17.1■□□□□ 0.33
CHD4-213ENST00000545584 MALRD1Q5VYJ5 2156 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 LRP5LA4QPB2 252 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 GMNCA6NCL1 334 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 NPIPB13A6NJU9 1138 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 NPIPB4C9JG80 1138 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 GSTA4O15217 222 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 CCDC22O60826 627 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 TACSTD2P09758 323 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 IFI30P13284 250 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 IGFBP5P24593 272 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 ALDH3B1P43353 468 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 HSF2Q03933 536 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 LAPTM4AQ15012 233 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 TAF11Q15544 211 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 ALG10Q5BKT4 473 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 C10orf128Q5T292 105 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 ARMC4Q5T2S8 1044 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 UGT2A3Q6UWM9 527 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 LRRC18Q8N456 261 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 TMEM158Q8WZ71 300 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 HPS1Q92902 700 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 BPIFA2Q96DR5 249 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 FNDC11Q9BVV2 318 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 TXNIPQ9H3M7 391 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 CMTM6Q9NX76 183 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 A4GNTQ9UNA3 340 aa17.09■□□□□ 0.33
CHD4-213ENST00000545584 IFNW1P05000 195 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 TSPAN19P0C672 248 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 FAM157BP0CG42 384 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 SAGP10523 405 aaPredicted RBP17.08■□□□□ 0.32
CHD4-213ENST00000545584 SRD5A1P18405 259 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 TCN1P20061 433 aaPredicted RBP17.08■□□□□ 0.32
CHD4-213ENST00000545584 APEX1P27695 318 aaKnown RBP17.08■□□□□ 0.32
CHD4-213ENST00000545584 APLNRP35414 380 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 RAD52P43351 418 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 ZNF133P52736 654 aaPredicted RBP17.08■□□□□ 0.32
CHD4-213ENST00000545584 SEC24CP53992 1094 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 LIPEQ05469 1076 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 CD47Q08722 323 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 MAD2L1BPQ15013 274 aaPredicted RBP17.08■□□□□ 0.32
CHD4-213ENST00000545584 NKPD1Q17RQ9 610 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 LRP11Q86VZ4 500 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 SLC15A3Q8IY34 581 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 ARIH2OSQ8N7S6 290 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 HOPXQ9BPY8 73 aaPredicted RBP17.08■□□□□ 0.32
CHD4-213ENST00000545584 BCL2L14Q9BZR8 327 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 SIAEQ9HAT2 523 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 SMURF2Q9HAU4 748 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 CCNB1IP1Q9NPC3 277 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 MED4Q9NPJ6 270 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 HIF3AQ9Y2N7 669 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 COL6A5A8TX70 2615 aa17.08■□□□□ 0.32
CHD4-213ENST00000545584 ANK3Q12955 4377 aaKnown RBP17.07■□□□□ 0.32
CHD4-213ENST00000545584 LYNX1G3V0Z9 82 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 PIP5K1CO60331 668 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 LILRA1O75019 489 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 SLC2A10O95528 541 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 SNAP29O95721 258 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 ZNF682O95780 498 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 LCKP06239 509 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 LYNX1P0DP58 116 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 COX4I1P13073 169 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 CCL2P13500 99 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 MDH1P40925 334 aaKnown RBP17.07■□□□□ 0.32
CHD4-213ENST00000545584 GUCA1AP43080 201 aaPredicted RBP17.07■□□□□ 0.32
CHD4-213ENST00000545584 YAP1P46937 504 aaKnown RBP17.07■□□□□ 0.32
CHD4-213ENST00000545584 MRPS34P82930 218 aaKnown RBP17.07■□□□□ 0.32
CHD4-213ENST00000545584 TOP3AQ13472 1001 aaPredicted RBP17.07■□□□□ 0.32
CHD4-213ENST00000545584 RIN1Q13671 783 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 TRAM2Q15035 370 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 FAM120AOSQ5T036 256 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 OFCC1Q8IZS5 231 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 FNDC8Q8TC99 324 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 SNX33Q8WV41 574 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 GEMIN6Q8WXD5 167 aaKnown RBP17.07■□□□□ 0.32
CHD4-213ENST00000545584 C11orf40Q8WZ69 217 aa17.07■□□□□ 0.32
CHD4-213ENST00000545584 HDAC2Q92769 488 aaKnown RBP17.07■□□□□ 0.32
CHD4-213ENST00000545584 RDH5Q92781 318 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms