RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 GIPRP48546 466 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 PPOXP50336 477 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 IDH3GP51553 393 aaPredicted RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 SEC24CP53992 1094 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 UGT2B15P54855 530 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 CTXN1P60606 82 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 MRPS34P82930 218 aaKnown RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 PRKCDQ05655 676 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 SCGB2A2Q13296 93 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 EFNB3Q15768 340 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 IQCCQ4KMZ1 466 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 FAM98BQ52LJ0 330 aaKnown RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 FGD3Q5JSP0 725 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 RGS7BPQ6MZT1 257 aaPredicted RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 PIGWQ7Z7B1 504 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 SYT9Q86SS6 491 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 ADCK1Q86TW2 530 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 MDP1Q86V88 176 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 JAZF1Q86VZ6 243 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 RBM45Q8IUH3 476 aaKnown RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 NKAIN4Q8IVV8 208 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 NRMQ8IXM6 262 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 C10orf111Q8N326 155 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 TEX29Q8N6K0 151 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 RBM15BQ8NDT2 890 aaKnown RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 NOXO1Q8NFA2 376 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 OR52L1Q8NGH7 329 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 TMEM54Q969K7 222 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 FBXO17Q96EF6 278 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 PYURFQ96I23 114 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 NSL1Q96IY1 281 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 CCT8L2Q96SF2 557 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 CDRT15Q96T59 188 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 VRK1Q99986 396 aaPredicted RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 PRR14Q9BWN1 585 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 SEC61A2Q9H9S3 476 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 NMNAT1Q9HAN9 279 aaPredicted RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 CYSLTR2Q9NS75 346 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 NPAP1Q9NZP6 1156 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 NDRG4Q9ULP0 352 aaKnown RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 TIMM10BQ9Y5J6 103 aa4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 CHD3Q12873 2000 aaKnown RBP4.88□□□□□ -1.63
CLSTN3-215ENST00000544584 IGHV2OR16-5A0A0B4J2B6 119 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 A0A1W2PPR1 153 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 A0A1W2PPW3 197 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 PLSCR5A0PG75 271 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 UNC119BA6NIH7 251 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 B2RBV5 119 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 H3BSA7 217 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 hCG_2039718K7EN88 272 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 M0R233 179 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 GNGT2O14610 69 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 IMPA2O14732 288 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 SMAD7O15105 426 aaKnown RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 SYNGR3O43761 229 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 TLX2O43763 284 aaPredicted RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 SSX4O60224 188 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 OR10H3O60404 316 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 TRMUO75648 421 aaKnown RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 ATP5HO75947 161 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 HPRP00739 348 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 RENP00797 406 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 IGHMP01871 453 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 HLA-HP01893 362 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 F13BP05160 661 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 CD14P08571 375 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 PGA4P0DJD7 388 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 PGA3P0DJD8 388 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 APEHP13798 732 aaKnown RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 ANPEPP15144 967 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 TCN1P20061 433 aaPredicted RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 HNF1AP20823 631 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 GSTM3P21266 225 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 TNFSF4P23510 183 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 EDNRAP25101 427 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 GLRXP35754 106 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 CDKN1AP38936 164 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 RGS6P49758 472 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 GDI2P50395 445 aaKnown RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 SPIBQ01892 262 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 SCRN3Q0VDG4 424 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 SNTB2Q13425 540 aaKnown RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 TOP3AQ13472 1001 aaPredicted RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 SGCAQ16586 387 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 NKPD1Q17RQ9 610 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 PCGF3Q3KNV8 242 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 SLC36A3Q495N2 470 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 DNAL1Q4LDG9 190 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 C10orf128Q5T292 105 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 TMEM154Q6P9G4 183 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 VHLLQ6RSH7 139 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 DPY19L2P2Q6ZN68 376 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 TMPRSS11FQ6ZWK6 438 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 Q71RC1 249 aaPredicted RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 VTCN1Q7Z7D3 282 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 PEG10Q86TG7 708 aaKnown RBP4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 COMTD1Q86VU5 262 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 DHFR2Q86XF0 187 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 PHC2Q8IXK0 858 aa4.87□□□□□ -1.63
CLSTN3-215ENST00000544584 DEFB107AQ8IZN7 70 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms