RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 YTHDF3Q7Z739 585 aaKnown RBP16.66■□□□□ 0.26
DDX55-211ENST00000544429 SLC22A24Q8N4F4 322 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 OR10G2Q8NGC3 310 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 NINJ1Q92982 152 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 NABP1Q96AH0 204 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 RASD2Q96D21 266 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 SAMD8Q96LT4 415 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 ZNF570Q96NI8 536 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 C1QTNF6Q9BXI9 259 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 NOX3Q9HBY0 568 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 VSX1Q9NZR4 365 aaPredicted RBP16.66■□□□□ 0.26
DDX55-211ENST00000544429 CDH10Q9Y6N8 788 aa16.66■□□□□ 0.26
DDX55-211ENST00000544429 OTOGQ6ZRI0 2925 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 IGHV1-18A0A0C4DH31 117 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 TEX13CA0A0J9YWL9 993 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 PRSS37A4D1T9 235 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 BHLHE40O14503 412 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 ABCD4O14678 606 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 ARHGEF9O43307 516 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 OR8G3PP0DMU2 310 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 SLC6A6P31641 620 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 RPS6KA3P51812 740 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 TUBA1BP68363 451 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 TUBA4AP68366 448 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 MRPS34P82930 218 aaKnown RBP16.65■□□□□ 0.26
DDX55-211ENST00000544429 CD47Q08722 323 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 KRR1Q13601 381 aaKnown RBP16.65■□□□□ 0.26
DDX55-211ENST00000544429 RPL13AP3Q6NVV1 102 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 PTCHD4Q6ZW05 846 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 TUBA1AQ71U36 451 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 ADCK1Q86TW2 530 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 SKA3Q8IX90 412 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 KBTBD8Q8NFY9 601 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 OR8D4Q8NGM9 314 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 GIPC3Q8TF64 312 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 RADILQ96JH8 1075 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 RBP7Q96R05 134 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 FEVQ99581 238 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 NIPSNAP1Q9BPW8 284 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 DENND2DQ9H6A0 471 aaPredicted RBP16.65■□□□□ 0.26
DDX55-211ENST00000544429 EGLN3Q9H6Z9 239 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 IER3IP1Q9Y5U9 82 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 AKAP9Q99996 3911 aa16.65■□□□□ 0.26
DDX55-211ENST00000544429 M0R1B8 84 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 HS3ST1O14792 307 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 IDH3BO43837 385 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 TIPRLO75663 272 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 ATE1O95260 518 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 PPP1R3DO95685 299 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 HLA-HP01893 362 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 GSTM3P21266 225 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 ZNF84P51523 738 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 ACTR3P61158 418 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 SPOCK1Q08629 439 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 COX10Q12887 443 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 ZNF672Q499Z4 452 aaPredicted RBP16.64■□□□□ 0.25
DDX55-211ENST00000544429 MDP1Q86V88 176 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 MYPOPQ86VE0 399 aaPredicted RBP16.64■□□□□ 0.25
DDX55-211ENST00000544429 ZNF611Q8N823 705 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 FGFBP3Q8TAT2 258 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 MBD6Q96DN6 1003 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 NRBF2Q96F24 287 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 SLC38A2Q96QD8 506 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 SNX18Q96RF0 628 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 PLA2G12AQ9BZM1 189 aa16.64■□□□□ 0.25
DDX55-211ENST00000544429 H7C1C5 153 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 ENTPD5O75356 428 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 DEAF1O75398 565 aaPredicted RBP16.63■□□□□ 0.25
DDX55-211ENST00000544429 CIB2O75838 187 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 CECR9P0C854 216 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 ZNF14P17017 642 aaPredicted RBP16.63■□□□□ 0.25
DDX55-211ENST00000544429 CD53P19397 219 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 ARR3P36575 388 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 CDKN2AP42771 156 aaKnown RBP16.63■□□□□ 0.25
DDX55-211ENST00000544429 LCN6P62502 163 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 ATP6AP1Q15904 470 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 ZNF362Q5T0B9 420 aaPredicted RBP16.63■□□□□ 0.25
DDX55-211ENST00000544429 C20orf204Q6ZNR8 217 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 HS3ST5Q8IZT8 346 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 AKAP1Q92667 903 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDX55-211ENST00000544429 NEUROG1Q92886 237 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 GTPBP3Q969Y2 492 aaKnown RBP16.63■□□□□ 0.25
DDX55-211ENST00000544429 ERMAPQ96PL5 475 aaPredicted RBP16.63■□□□□ 0.25
DDX55-211ENST00000544429 DDOQ99489 341 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 SEC61A2Q9H9S3 476 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 SIAEQ9HAT2 523 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 REV1Q9UBZ9 1251 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 AP4S1Q9Y587 144 aa16.63■□□□□ 0.25
DDX55-211ENST00000544429 CREBBPQ92793 2442 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 RTTNQ86VV8 2226 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 SOCS2O14508 198 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 XKRYO14609 159 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 GNGT2O14610 69 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 UBL3O95164 117 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 RAF1P04049 648 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 CELA3BP08861 270 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 CTLA4P16410 223 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 NPR2P20594 1047 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 CDAP32320 146 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 GSG1Q2KHT4 349 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms