RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 STEAP1BQ6NZ63 245 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 TAF8Q7Z7C8 310 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 ZBTB44Q8NCP5 570 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 OR51S1Q8NGJ8 323 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 OTOSQ8NHW6 89 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 MOGAT1Q96PD6 335 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 TSPAN32Q96QS1 320 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 SLC6A17Q9H1V8 727 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 OR10A5Q9H207 317 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 WSB2Q9NYS7 404 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-208ENST00000543633 FAM171A2A8MVW0 826 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 H0Y8X5 98 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 TSPAN4O14817 238 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 SDC3O75056 442 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 TSPAN9O75954 239 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 AKR7A3O95154 331 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 HPP00738 406 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 AKT2P31751 481 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 RPL18Q07020 188 aaKnown RBP12.43□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF345Q14585 488 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 C2orf68Q2NKX9 166 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 CLVS2Q5SYC1 327 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 PRSS35Q8N3Z0 413 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 C10orf53Q8N6V4 93 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF615Q8N8J6 731 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 FAM3DQ96BQ1 224 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 SIPA1Q96FS4 1042 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 TSSK2Q96PF2 358 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 OR8B4Q96RC9 309 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 GPR174Q9BXC1 333 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 MFFQ9GZY8 342 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 EXO5Q9H790 373 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 ZC4H2Q9NQZ6 224 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 CLEC1BQ9P126 229 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 EPHA6Q9UF33 1036 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 HEATR5AQ86XA9 2040 aa12.43□□□□□ -0.42
VPS33A-208ENST00000543633 A0A087WV48 116 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 TMEM272A0A1B0GTI8 110 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 A8MUA0 341 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 HRKO00198 91 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 TOR1AO14656 332 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 COL9A1P20849 921 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 SLC6A8P48029 635 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 C11orf88Q6PI97 169 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 GABRG1Q8N1C3 465 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 STPG2Q8N412 459 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 OR51D1Q8NGF3 324 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 TSEN15Q8WW01 171 aaKnown RBP12.42□□□□□ -0.42
VPS33A-208ENST00000543633 WDR89Q96FK6 387 aaPredicted RBP12.42□□□□□ -0.42
VPS33A-208ENST00000543633 KXD1Q9BQD3 176 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 TMEM138Q9NPI0 162 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 CLDN16Q9Y5I7 305 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 TRAV18A0A075B6X5 111 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.42□□□□□ -0.42
VPS33A-208ENST00000543633 DCTN6O00399 190 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 NSA2O95478 260 aaKnown RBP12.42□□□□□ -0.42
VPS33A-208ENST00000543633 IL33O95760 270 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 IL32P24001 234 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 CAPZA1P52907 286 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 HSD17B7P56937 341 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 EGR4Q05215 589 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 PLA2G7Q13093 441 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 BTN1A1Q13410 526 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 SERTAD2Q14140 314 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 GRM7Q14831 915 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 WDR38Q5JTN6 314 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 TEX30Q5JUR7 227 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 DCAF12L2Q5VW00 463 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 ARMC6Q6NXE6 501 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 C12orf45Q8N5I9 185 aaPredicted RBP12.42□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 C19orf47Q8N9M1 422 aaKnown RBP12.42□□□□□ -0.42
VPS33A-208ENST00000543633 OR10AC1Q8NH08 325 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 RNF128Q8TEB7 428 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 ARPC5LQ9BPX5 153 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 S1PR5Q9H228 398 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 SRA1Q9HD15 236 aaKnown RBP12.42□□□□□ -0.42
VPS33A-208ENST00000543633 HS3ST3A1Q9Y663 406 aa12.42□□□□□ -0.42
VPS33A-208ENST00000543633 A0A1B0GTI1 187 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 TMEM82A0PJX8 343 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 SCDO00767 359 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 DOK2O60496 412 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 CDC123O75794 336 aaPredicted RBP12.41□□□□□ -0.42
VPS33A-208ENST00000543633 SIX6O95475 246 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 TNFP01375 233 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 CLPSP04118 112 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 CD3DP04234 171 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 SLC25A4P12235 298 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 TPMTP51580 245 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 EFNB2P52799 333 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 ROM1Q03395 351 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 DLX2Q07687 328 aaPredicted RBP12.41□□□□□ -0.42
VPS33A-208ENST00000543633 SLC17A1Q14916 467 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 ZMYND11Q15326 602 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 C4orf46Q504U0 113 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 GLT8D1Q68CQ7 371 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 TMEM205Q6UW68 189 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 DPY19L4Q7Z388 723 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF679Q8IYX0 411 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms