RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CENPSQ8N2Z9 138 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 KDM8Q8N371 416 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 OR4F15Q8NGB8 312 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM255BQ8WV15 326 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ST8SIA1Q92185 356 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 CSF3RQ99062 836 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 FUNDC2Q9BWH2 189 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 TAS2R3Q9NYW6 316 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 NKX6-3A6NJ46 265 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 D6RAR5 112 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 K7EQS6 105 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 CXCL13O43927 109 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 MRPS14O60783 128 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 KCNK2O95069 426 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ACAA2P42765 397 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 LSSP48449 732 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ZXDAP98168 799 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 CLN3Q13286 438 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 MPEG1Q2M385 716 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ARHGAP11BQ3KRB8 267 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 TBPL2Q6SJ96 375 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 NPSR1Q6W5P4 371 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 CYHR1Q6ZMK1 362 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 SPRED1Q7Z699 444 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 WFDC8Q8IUA0 241 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 LINC00346Q8IVM7 164 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 SIMC1Q8NDZ2 872 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 OR13C9Q8NGT0 318 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 BRIX1Q8TDN6 353 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 GPBAR1Q8TDU6 330 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ANKRD60Q9BZ19 345 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 LANCL2Q9NS86 450 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 B3GAT1Q9P2W7 334 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 GNG12Q9UBI6 72 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 V9GY05 133 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ADAMTS7Q9UKP4 1686 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 HRO43593 1189 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 THBS1P07996 1170 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 MAKP20794 623 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 PTH2RP49190 550 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF91Q05481 1191 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 SF3A2Q15428 464 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 RTL6Q6ICC9 239 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 FAM199XQ6PEV8 388 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 DND1Q8IYX4 353 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 BHLHE23Q8NDY6 225 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 OR4D9Q8NGE8 314 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 TTC9Q92623 222 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 SPACA9Q96E40 222 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 WDR76Q9H967 626 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 PRMT8Q9NR22 394 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ICOSLGO75144 302 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 CBR3O75828 277 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 NXPH2O95156 264 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 GASTP01350 101 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 OR2T7P0C7T2 308 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 XKR7Q5GH72 579 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 EXOSC6Q5RKV6 272 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 PHYHD1Q5SRE7 291 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 RPL22L1Q6P5R6 122 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 S100A7AQ86SG5 101 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 VASH2Q86V25 355 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 OR2T27Q8NH04 317 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 H1FXQ92522 213 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 MIB2Q96AX9 1013 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 SPIN2AQ99865 258 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 SPIN2BQ9BPZ2 258 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 C1QTNF6Q9BXI9 259 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 RANBP3Q9H6Z4 567 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 CHST11Q9NPF2 352 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ENPP5Q9UJA9 477 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 B3GALT1Q9Y5Z6 326 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 CNOT1A5YKK6 2376 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 LAMB2P55268 1798 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 I6L893 689 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ALDOBP05062 364 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 HOXC4P09017 264 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 T-ENOLP0DO92 83 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 FPR3P25089 353 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 AVPR2P30518 371 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 IDH3GP51553 393 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 CLDN15P56746 228 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 IKZF1Q13422 519 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 P2RY14Q15391 338 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 OR1C1Q15619 314 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 SPRED2Q7Z698 418 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF573Q86YE8 665 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC35A4Q96G79 324 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 GPR78Q96P69 363 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 SORCS2Q96PQ0 1159 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 CACNG6Q9BXT2 260 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 MAN2C1Q9NTJ4 1040 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 FBXO4Q9UKT5 387 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 PPIL1Q9Y3C6 166 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC22A20A6NK97 555 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 MCRIP1C9JLW8 97 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 SGCEO43556 437 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 CREBL2O60519 120 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms