RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 TMEM19Q96HH6 336 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 ZNF514Q96K75 400 aaPredicted RBP10.3□□□□□ -0.76
CDH4-201ENST00000543233 TEAD3Q99594 435 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 MICU1Q9BPX6 476 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 FAM83CQ9BQN1 747 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 TMEM27Q9HBJ8 222 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 OR2S2Q9NQN1 319 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 ZSCAN32Q9NX65 697 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 GNG8Q9UK08 70 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 FBXL4Q9UKA2 621 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 LRRK1Q38SD2 2015 aa10.3□□□□□ -0.76
CDH4-201ENST00000543233 A0A087WZY1 265 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 NPIPB8E9PQR5 432 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 MBPP02686 304 aaPredicted RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 ACP2P11117 423 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 THBS2P35442 1172 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 AQP2P41181 271 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TAS2R38P59533 333 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 RUNX3Q13761 415 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 C14orf28Q4W4Y0 310 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 CDC73Q6P1J9 531 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TMED4Q7Z7H5 227 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 FAM129CQ86XR2 697 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 INO80EQ8NBZ0 244 aaPredicted RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 CD300LFQ8TDQ1 290 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 GPR148Q8TDV2 347 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 RNF141Q8WVD5 230 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 GEMIN6Q8WXD5 167 aaKnown RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 KCTD12Q96CX2 325 aaKnown RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 ZNF385AQ96PM9 386 aaKnown RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 CORO2BQ9UQ03 480 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 ARID1AO14497 2285 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 CNTRLQ7Z7A1 2325 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3DA0A087WVF3 549 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3IA0A087WXS9 549 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3EA0A087X179 549 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3KA0A087X1G2 549 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 A0A0B4J2A0 478 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 OR5H15A6NDH6 313 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3FA6NER0 549 aaPredicted RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 OR5H1A6NKK0 313 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3LB9A6J9 549 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 CCSO14618 274 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 LINC01565O15544 149 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 ITGA5P08648 1049 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3HP0C7X1 549 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 ST6GAL1P15907 406 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 FGF7P21781 194 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 PCBP4P57723 403 aaKnown RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 LSM11P83369 360 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDH4-201ENST00000543233 ENPP2Q13822 863 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 SLC10A1Q14973 349 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 CST6Q15828 149 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 SYPL1Q16563 259 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 ZNF658BQ4V348 819 aaPredicted RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 CLEC12AQ5QGZ9 265 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3GQ6DHY5 549 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3CQ6IPX1 549 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TBC1D3Q8IZP1 549 aaPredicted RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 KCNRGQ8N5I3 272 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 SLC38A5Q8WUX1 472 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 SECTM1Q8WVN6 248 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 PHYHIPLQ96FC7 376 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 PACRGQ96M98 296 aaPredicted RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 UBQLN3Q9H347 655 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 DPEP2Q9H4A9 486 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 MYNNQ9NPC7 610 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 SHPKQ9UHJ6 478 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 STARD10Q9Y365 291 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 REM1O75628 298 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 ADAP00813 363 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 CDH11P55287 796 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 CLDN2P57739 230 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 SLC26A5P58743 744 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 RAB40BQ12829 278 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 LRP11Q86VZ4 500 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 SLC35F3Q8IY50 421 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 C19orf47Q8N9M1 422 aaKnown RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 THAP3Q8WTV1 239 aaPredicted RBP10.29□□□□□ -0.76
CDH4-201ENST00000543233 RSC1A1Q92681 617 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TM4SF18Q96CE8 201 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 TWSG1Q9GZX9 223 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 MED17Q9NVC6 651 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 AHSPQ9NZD4 102 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 ANGPT4Q9Y264 503 aa10.29□□□□□ -0.76
CDH4-201ENST00000543233 SNRNP200O75643 2136 aaKnown RBP10.28□□□□□ -0.76
CDH4-201ENST00000543233 TNRC18O15417 2968 aaPredicted RBP10.28□□□□□ -0.76
CDH4-201ENST00000543233 HELZP42694 1942 aaKnown RBP10.28□□□□□ -0.76
CDH4-201ENST00000543233 TRAV14DV4A0A0A6YYC5 116 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 SERTM1A2A2V5 107 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 NAP1L6A6NFF2 107 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 TMEM210A6NLX4 147 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 M0R3H8 397 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 ERI3O43414 337 aaKnown RBP10.28□□□□□ -0.76
CDH4-201ENST00000543233 FRS3O43559 492 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 SMPD2O60906 423 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 ITGA10O75578 1167 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 RAP1AP62834 184 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 PXKQ7Z7A4 578 aa10.28□□□□□ -0.76
CDH4-201ENST00000543233 OR5K2Q8NHB8 316 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms