RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 HMGA2P52926 109 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 RAB1AP62820 205 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 HGFACQ04756 655 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 CD47Q08722 323 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 NRN1LQ496H8 165 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 DNAL1Q4LDG9 190 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 MESTQ5EB52 335 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 AGAP6Q5VW22 663 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 FAM205BPQ63HN1 556 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 ZNF544Q6NX49 715 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 MUC15Q8N387 334 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 OR4C15Q8NGM1 316 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 GTPBP3Q969Y2 492 aaKnown RBP14.65□□□□□ -0.06
CD9-209ENST00000540891 NABP1Q96AH0 204 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 Q96M85 177 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 NRIP3Q9NQ35 241 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 DLL4Q9NR61 685 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 FAIMQ9NVQ4 179 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 IL20RAQ9UHF4 553 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 AURKCQ9UQB9 309 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 LYVE1Q9Y5Y7 322 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 PLCE1Q9P212 2302 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 ITPR3Q14573 2671 aa14.65□□□□□ -0.06
CD9-209ENST00000540891 UNC119BA6NIH7 251 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 GYG2O15488 501 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 NDUFB2O95178 105 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 CDAP32320 146 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 RPL4P36578 427 aaKnown RBP14.64□□□□□ -0.07
CD9-209ENST00000540891 PTDSS1P48651 473 aaKnown RBP14.64□□□□□ -0.07
CD9-209ENST00000540891 ZNF84P51523 738 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 BNIP1Q12981 228 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 PRSS57Q6UWY2 283 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 YTHDF3Q7Z739 585 aaKnown RBP14.64□□□□□ -0.07
CD9-209ENST00000540891 ZNF584Q8IVC4 421 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 NANOS1Q8WY41 292 aaKnown RBP14.64□□□□□ -0.07
CD9-209ENST00000540891 NSMAFQ92636 917 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 HEATR1Q9H583 2144 aaKnown RBP14.64□□□□□ -0.07
CD9-209ENST00000540891 KRCC1Q9NPI7 259 aaPredicted RBP14.64□□□□□ -0.07
CD9-209ENST00000540891 CA10Q9NS85 328 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 CBLN4Q9NTU7 201 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 VNN3Q9NY84 501 aa14.64□□□□□ -0.07
CD9-209ENST00000540891 ARID1AO14497 2285 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 A6NIZ1 184 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 H7C1C5 153 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 ARHGEF9O43307 516 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 OR10H3O60404 316 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 NDUFS7O75251 213 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 KRT36O76013 467 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 CD99P14209 185 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 FPR3P25089 353 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 APOBEC3AP31941 199 aaPredicted RBP14.63□□□□□ -0.07
CD9-209ENST00000540891 GSSP48637 474 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 ATP5J2P56134 94 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 RAP1BP61224 184 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 LCN6P62502 163 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 RAP1AP62834 184 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 MRPS34P82930 218 aaKnown RBP14.63□□□□□ -0.07
CD9-209ENST00000540891 TRAP1Q12931 704 aaKnown RBP14.63□□□□□ -0.07
CD9-209ENST00000540891 MST1LQ2TV78 715 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 THEM4Q5T1C6 240 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 C1orf94Q6P1W5 598 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 PGBD2Q6P3X8 592 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 FOXL2NBQ6ZUU3 175 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 ADGRG5Q8IZF4 528 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 FBXL14Q8N1E6 418 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 NUP37Q8NFH4 326 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 RASD2Q96D21 266 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 ZNF570Q96NI8 536 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 KCNS3Q9BQ31 491 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 BTBD10Q9BSF8 475 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 DENND2DQ9H6A0 471 aaPredicted RBP14.63□□□□□ -0.07
CD9-209ENST00000540891 GRHPRQ9UBQ7 328 aa14.63□□□□□ -0.07
CD9-209ENST00000540891 TEX13CA0A0J9YWL9 993 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 SLC22A23A1A5C7 686 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 TNFRSF11BO00300 401 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 IMPA2O14732 288 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 FARS2O95363 451 aaKnown RBP14.62□□□□□ -0.07
CD9-209ENST00000540891 RAB36O95755 333 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 MMP7P09237 267 aaPredicted RBP14.62□□□□□ -0.07
CD9-209ENST00000540891 NR2C1P13056 603 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 ZNF35P13682 527 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 SDHAP31040 664 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 CHRNB3Q05901 458 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 PPP1R8Q12972 351 aaKnown RBP14.62□□□□□ -0.07
CD9-209ENST00000540891 RAB39AQ14964 217 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 SWI5Q1ZZU3 235 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 ZNF770Q6IQ21 691 aaPredicted RBP14.62□□□□□ -0.07
CD9-209ENST00000540891 SLC16A14Q7RTX9 510 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 LRRC18Q8N456 261 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 IL17RDQ8NFM7 739 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 OR4F15Q8NGB8 312 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 OR9Q2Q8NGE9 314 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 FNDC8Q8TC99 324 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 LRGUKQ96M69 825 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 Q96MF0 132 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 RBP7Q96R05 134 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 CACNG6Q9BXT2 260 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 TRIM15Q9C019 465 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 OR52D1Q9H346 318 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 SIAEQ9HAT2 523 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms