RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 RAP1AP62834 184 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 TRAM1Q15629 374 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 MS4A18Q3C1V0 323 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 GLYR1Q49A26 553 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-204ENST00000540846 FAM205BPQ63HN1 556 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 DMKNQ6E0U4 476 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-204ENST00000540846 PCSK4Q6UW60 755 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 ASB18Q6ZVZ8 466 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 PM20D2Q8IYS1 436 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 Q8NA96 180 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF511Q8NB15 262 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 OR5M1Q8NGP8 315 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 SLC25A46Q96AG3 418 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 PELI1Q96FA3 418 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 DCLRE1CQ96SD1 692 aaKnown RBP11.15□□□□□ -0.62
SMAD3-204ENST00000540846 MNTQ99583 582 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 C6orf62Q9GZU0 229 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-204ENST00000540846 ZDHHC11Q9H8X9 412 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 QPCTLQ9NXS2 382 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 ST6GALNAC2Q9UJ37 374 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 B3GALT5Q9Y2C3 310 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 FAM171A2A8MVW0 826 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 CDRT1O95170 752 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 TCEA1P23193 301 aaKnown RBP11.14□□□□□ -0.63
SMAD3-204ENST00000540846 GDF1P27539 372 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 CENPAP49450 140 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 DAP3P51398 398 aaKnown RBP11.14□□□□□ -0.63
SMAD3-204ENST00000540846 RORCP51449 518 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 GFRA1P56159 465 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 PLEKHN1Q494U1 663 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-204ENST00000540846 TP53I3Q53FA7 332 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 ZNF684Q5T5D7 378 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 RPUSD3Q6P087 351 aaKnown RBP11.14□□□□□ -0.63
SMAD3-204ENST00000540846 TMEM91Q6ZNR0 172 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 PXKQ7Z7A4 578 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 YRDCQ86U90 279 aaKnown RBP11.14□□□□□ -0.63
SMAD3-204ENST00000540846 EGFL6Q8IUX8 553 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 SYT14Q8NB59 555 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 RPS4Y2Q8TD47 263 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 DTNBP1Q96EV8 351 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 CNTNAP3BQ96NU0 1288 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 MFRPQ9BY79 579 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 CNTNAP3Q9BZ76 1288 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 BARHL1Q9BZE3 327 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 SNTG1Q9NSN8 517 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 GALNT8Q9NY28 637 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 DKKL1Q9UK85 242 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 RPH3AQ9Y2J0 694 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-204ENST00000540846 HDGFL3Q9Y3E1 203 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 PEX16Q9Y5Y5 336 aa11.14□□□□□ -0.63
SMAD3-204ENST00000540846 EPG5Q9HCE0 2579 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 IGLV1-36A0A0B4J1U3 117 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 IQCMA0A1B0GVH7 501 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 SLC22A23A1A5C7 686 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 OGG1O15527 345 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 WISP2O76076 250 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 CD1AP06126 327 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 HLA-DOBP13765 273 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 SHC1P29353 583 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 SDC2P34741 201 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 ETV6P41212 452 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 GBX2P52951 348 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-204ENST00000540846 BLVRAP53004 296 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 PPIAP62937 165 aaKnown RBP11.13□□□□□ -0.63
SMAD3-204ENST00000540846 HSF1Q00613 529 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 INAQ16352 499 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 ZNF239Q16600 458 aaKnown RBP11.13□□□□□ -0.63
SMAD3-204ENST00000540846 WIPI1Q5MNZ9 446 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-204ENST00000540846 ARL9Q6T311 187 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 TRILQ7L0X0 811 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 CDC20BQ86Y33 519 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 SIAH3Q8IW03 269 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 FAM109AQ8N4B1 249 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 SNX33Q8WV41 574 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 RELTQ969Z4 430 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 SMIM19Q96E16 107 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 PGLYRP3Q96LB9 341 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 KLHL15Q96M94 604 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 HDHD5Q9BXW7 423 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 TTTY10Q9BZA0 68 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 NUAK2Q9H093 628 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 KCNN2Q9H2S1 579 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 RERGLQ9H628 205 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 SMURF1Q9HCE7 757 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 SRA1Q9HD15 236 aaKnown RBP11.13□□□□□ -0.63
SMAD3-204ENST00000540846 ACKR4Q9NPB9 350 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 ZNF71Q9NQZ8 489 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-204ENST00000540846 ACOXLQ9NUZ1 547 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 CRNNQ9UBG3 495 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-204ENST00000540846 B4GALT7Q9UBV7 327 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 B9D1Q9UPM9 204 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 KLHDC2Q9Y2U9 406 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 LIPGQ9Y5X9 500 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 IGSF10Q6WRI0 2623 aa11.13□□□□□ -0.63
SMAD3-204ENST00000540846 PRR32B1ATL7 298 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 NPIPA5E9PKD4 350 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 SC5DO75845 299 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 AKR7A3O95154 331 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 S100A5P33763 92 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms