RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TAF11Q15544 211 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 SLC36A2Q495M3 483 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 UGT2A3Q6UWM9 527 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 LRP11Q86VZ4 500 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 SLC15A3Q8IY34 581 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 MICU2Q8IYU8 434 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 PAQR4Q8N4S7 273 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 ARIH2OSQ8N7S6 290 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 SLC30A7Q8NEW0 376 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 NOXO1Q8NFA2 376 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 OR2T12Q8NG77 320 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 OR4K5Q8NGD3 323 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 RP9Q8TA86 221 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 NABP1Q96AH0 204 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 SHARPINQ9H0F6 387 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 RACGAP1Q9H0H5 632 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 TXNIPQ9H3M7 391 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 SIAEQ9HAT2 523 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 DYNLRB1Q9NP97 96 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 INIPQ9NRY2 104 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 CMTM6Q9NX76 183 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 MYEF2Q9P2K5 600 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 KCNS2Q9ULS6 477 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 MED31Q9Y3C7 131 aa11.25□□□□□ -0.61
SEMA4D-223ENST00000540475 SHOX2O60902 331 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 PRSS23O95084 383 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 ZNF84P51523 738 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 CLRN1P58418 232 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 FHL1Q13642 323 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 ANKDD1AQ495B1 522 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 IQCCQ4KMZ1 466 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 FAM120AOSQ5T036 256 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 TMEM53Q6P2H8 277 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 SLC25A47Q6Q0C1 308 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 DEF8Q6ZN54 512 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 SLC16A14Q7RTX9 510 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 ARPINQ7Z6K5 226 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 LRRC75AQ8NAA5 344 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 FAM156AQ8NDB6 213 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 MOSPD2Q8NHP6 518 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 TMEM158Q8WZ71 300 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 HDAC2Q92769 488 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 HOPXQ9BPY8 73 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 MAN2C1Q9NTJ4 1040 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 CAPN7Q9Y6W3 813 aa11.24□□□□□ -0.61
SEMA4D-223ENST00000540475 LRP5LA4QPB2 252 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 FFAR1O14842 300 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 PHF1O43189 567 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 ICMTO60725 284 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 HPXP02790 462 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 FUT4P22083 530 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 ACHEP22303 614 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 COL8A2P25067 703 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 IL2RGP31785 369 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 LSP1P33241 339 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 RAD52P43351 418 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 SEC24CP53992 1094 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 UCP2P55851 309 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 TMEM33P57088 247 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 GUCY1A3Q02108 690 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 PRKCDQ05655 676 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 CARTPTQ16568 116 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 GKAP1Q5VSY0 366 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 FAM27BQ5VT28 67 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 HACD2Q6Y1H2 254 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 FOXL2NBQ6ZUU3 175 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 CBLL1Q75N03 491 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 PHC2Q8IXK0 858 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 RNF113BQ8IZP6 322 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 OFCC1Q8IZS5 231 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 SYT14Q8NB59 555 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 CPEB3Q8NE35 698 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 OR1J2Q8NGS2 313 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 ZNF519Q8TB69 540 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 FNDC8Q8TC99 324 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 RDH5Q92781 318 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 RCN3Q96D15 328 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 BPIFA2Q96DR5 249 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 SYT3Q9BQG1 590 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 ALG12Q9BV10 488 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 BCL2L14Q9BZR8 327 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 TPK1Q9H3S4 243 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 CHODLQ9H9P2 273 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 NKIRAS2Q9NYR9 191 aa11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 ZNF346Q9UL40 294 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-223ENST00000540475 IGKV1D-43A0A0B4J1Z2 117 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 GMNCA6NCL1 334 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 LYNX1G3V0Z9 82 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 RP2O75695 350 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 TGFAP01135 160 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 LYNX1P0DP58 116 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 NR2C1P13056 603 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 ALDH3B1P43353 468 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 CDH15P55291 814 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 MYBPC1Q00872 1141 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 TRIP10Q15642 601 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 TBC1D28Q2M2D7 210 aa11.22□□□□□ -0.61
SEMA4D-223ENST00000540475 LRRC23Q53EV4 343 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms