RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SLC25A47Q6Q0C1 308 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 ARIH2OSQ8N7S6 290 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 NSMAFQ92636 917 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 GTPBP3Q969Y2 492 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 ALG12Q9BV10 488 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 CXorf56Q9H5V9 222 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 MAGIXQ9H6Y5 334 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 VNN3Q9NY84 501 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 STX18Q9P2W9 335 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 LYVE1Q9Y5Y7 322 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 ARID1AO14497 2285 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 IGHV2OR16-5A0A0B4J2B6 119 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 OR10H3O60404 316 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 NDUFB2O95178 105 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 CRYAAP02489 173 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 OR8G3PP0DMU2 310 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 ZNF14P17017 642 aaPredicted RBP15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 PTDSS1P48651 473 aaKnown RBP15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 FABP6P51161 128 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 HGFACQ04756 655 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 TRAP1Q12931 704 aaKnown RBP15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 Q5PR19 223 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 C11orf71Q6IPW1 123 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 ADGRG5Q8IZF4 528 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 OR4C15Q8NGM1 316 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 SMURF2Q9HAU4 748 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 MOV10Q9HCE1 1003 aaKnown RBP15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 NRIP3Q9NQ35 241 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 TMCC3Q9ULS5 477 aa15.87■□□□□ 0.13
SNRPA1-203ENST00000540017 A6NIZ1 184 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 TNFRSF11BO00300 401 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 IMPA2O14732 288 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 ARHGEF9O43307 516 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 TMCC2O75069 709 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 NDUFS7O75251 213 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 DNAJC8O75937 253 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 GSSP48637 474 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 ZNF84P51523 738 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 RAP1BP61224 184 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 RAP1AP62834 184 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 CHRNB3Q05901 458 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 RAB39AQ14964 217 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 FAM98BQ52LJ0 330 aaKnown RBP15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 FAM205BPQ63HN1 556 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 C1orf94Q6P1W5 598 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 PGBD2Q6P3X8 592 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 ZNF584Q8IVC4 421 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 MUC15Q8N387 334 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 NANOS1Q8WY41 292 aaKnown RBP15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 NABP1Q96AH0 204 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 RASD2Q96D21 266 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 LRGUKQ96M69 825 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 GPX7Q96SL4 187 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 KCNS3Q9BQ31 491 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 TMUB1Q9BVT8 246 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 CADM1Q9BY67 442 aaKnown RBP15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 GRIP2Q9C0E4 1043 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 KRCC1Q9NPI7 259 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 GRHPRQ9UBQ7 328 aa15.86■□□□□ 0.13
SNRPA1-203ENST00000540017 TEX13CA0A0J9YWL9 993 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 GSC2O15499 205 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 KRT36O76013 467 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 UBL3O95164 117 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 FPR3P25089 353 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 APOBEC3AP31941 199 aaPredicted RBP15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 MRPS34P82930 218 aaKnown RBP15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 THEM4Q5T1C6 240 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 AGAP6Q5VW22 663 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 SHEQ5VZ18 495 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 ZNF544Q6NX49 715 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 SMARCD3Q6STE5 483 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 FBXL14Q8N1E6 418 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 LRRC18Q8N456 261 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 OR9Q2Q8NGE9 314 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 CANT1Q8WVQ1 401 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 ZNF570Q96NI8 536 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 RBP7Q96R05 134 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 CBLN4Q9NTU7 201 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 FAIMQ9NVQ4 179 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 IER3IP1Q9Y5U9 82 aa15.85■□□□□ 0.13
SNRPA1-203ENST00000540017 SLC22A23A1A5C7 686 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 FARS2O95363 451 aaKnown RBP15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 SCG5P05408 212 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 RAP2AP10114 183 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 ZNF35P13682 527 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 ATP5J2P56134 94 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 ETFDHQ16134 617 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 MST1LQ2TV78 715 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 NRN1LQ496H8 165 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 OR2T5Q6IEZ7 315 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 ZNF770Q6IQ21 691 aaPredicted RBP15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 VHLLQ6RSH7 139 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 DPY19L2P2Q6ZN68 376 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 SLC16A14Q7RTX9 510 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 YTHDF3Q7Z739 585 aaKnown RBP15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 OR2T29Q8NH02 315 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 FANK1Q8TC84 345 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 GNPDA2Q8TDQ7 276 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 CHID1Q9BWS9 393 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 TRIM15Q9C019 465 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms