RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 BET1O15155 118 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 AKAP8O43823 692 aaKnown RBP15.13■□□□□ 0.01
COPS3-212ENST00000539941 PLGP00747 810 aaPredicted RBP15.13■□□□□ 0.01
COPS3-212ENST00000539941 GADD45AP24522 165 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 FOXO1Q12778 655 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 TPBGQ13641 420 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 DOC2BQ14184 412 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 SSX1Q16384 188 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 ATP1A1-AS1Q5TC04 95 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 EEF1A1P5Q5VTE0 462 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 SPINK14Q6IE38 97 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 ZNF322Q6U7Q0 402 aaPredicted RBP15.13■□□□□ 0.01
COPS3-212ENST00000539941 GDPGP1Q6ZNW5 385 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 KBTBD8Q8NFY9 601 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 OR2M7Q8NG81 312 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 MRPL48Q96GC5 212 aaKnown RBP15.13■□□□□ 0.01
COPS3-212ENST00000539941 ALG8Q9BVK2 526 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 NPIPA1Q9UND3 350 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 CFAP47Q6ZTR5 3102 aa15.13■□□□□ 0.01
COPS3-212ENST00000539941 LOC102725191A0A1B0GVB3 256 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 LINC01387J3KSC0 135 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 SULT2B1O00204 365 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 AKR7A3O95154 331 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 MRPL3P09001 348 aaKnown RBP15.12■□□□□ 0.01
COPS3-212ENST00000539941 SHC1P29353 583 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 SFTPDP35247 375 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 BLVRAP53004 296 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 B3GALT5-AS1P59052 145 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 HSF1Q00613 529 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 HSF2Q03933 536 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 MFAP5Q13361 173 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 LINC00696Q6ZRV3 163 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 GDPD3Q7L5L3 318 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 OR6K6Q8NGW6 343 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 ASB10Q8WXI3 467 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 GATAD2BQ8WXI9 593 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 SIGLEC12Q96PQ1 595 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 ACOXLQ9NUZ1 547 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 B4GALT7Q9UBV7 327 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 ZMIZ1Q9ULJ6 1067 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 POLHQ9Y253 713 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 ZFHX4Q86UP3 3567 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 MED13Q9UHV7 2174 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 A0A1W2PNR3 127 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 OR5H15A6NDH6 313 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 ZNF891A8MT65 544 aaPredicted RBP15.12■□□□□ 0.01
COPS3-212ENST00000539941 NKX2-8O15522 239 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 DNPH1O43598 174 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 EIF1BO60739 113 aaKnown RBP15.12■□□□□ 0.01
COPS3-212ENST00000539941 PSMA1P25786 263 aaKnown RBP15.12■□□□□ 0.01
COPS3-212ENST00000539941 P2RY4P51582 365 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 GPR85P60893 370 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 VBP1P61758 197 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 CSNK2A1P68400 391 aaPredicted RBP15.12■□□□□ 0.01
COPS3-212ENST00000539941 CLN3Q13286 438 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 TOMM20Q15388 145 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 ESCO2Q56NI9 601 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 SLC35D2Q76EJ3 337 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 NOXA1Q86UR1 476 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 PHC2Q8IXK0 858 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 SLC35F2Q8IXU6 374 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 GHDCQ8N2G8 530 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 MDS2Q8NDY4 140 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 OR51L1Q8NGJ5 315 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 OR14L1PQ8NHC6 308 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 TM9SF4Q92544 642 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 UFD1Q92890 307 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 RPL3LQ92901 407 aaKnown RBP15.12■□□□□ 0.01
COPS3-212ENST00000539941 DCSTAMPQ9H295 470 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 SYT4Q9H2B2 425 aa15.12■□□□□ 0.01
COPS3-212ENST00000539941 KLF13Q9Y2Y9 288 aaPredicted RBP15.12■□□□□ 0.01
COPS3-212ENST00000539941 AQP7P3A6NL99 342 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 TFP02787 698 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 MT-ND5P03915 603 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 IL7P13232 177 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 ERP29P30040 261 aaKnown RBP15.11■□□□□ 0.01
COPS3-212ENST00000539941 ACTA2P62736 377 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 ACTG2P63267 376 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 POU3F1Q03052 451 aaPredicted RBP15.11■□□□□ 0.01
COPS3-212ENST00000539941 ZNF85Q03923 595 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 GPR50Q13585 617 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 FAM122CQ6P4D5 195 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 SLC16A9Q7RTY1 509 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 PM20D2Q8IYS1 436 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 OR6V1Q8N148 313 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 FAM83FQ8NEG4 500 aaPredicted RBP15.11■□□□□ 0.01
COPS3-212ENST00000539941 SPRYD4Q8WW59 207 aaPredicted RBP15.11■□□□□ 0.01
COPS3-212ENST00000539941 ZNRF4Q8WWF5 429 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 RELTQ969Z4 430 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 ST6GAL2Q96JF0 529 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 KLHL15Q96M94 604 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 OXGR1Q96P68 337 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 MNTQ99583 582 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 NUAK2Q9H093 628 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 B3GAT1Q9P2W7 334 aa15.11■□□□□ 0.01
COPS3-212ENST00000539941 SLC22A23A1A5C7 686 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 TMEM8BA6NDV4 472 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 H7C1C5 153 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 F10P00742 488 aa15.1■□□□□ 0.01
COPS3-212ENST00000539941 RFPL3SP0C7P2 107 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms