RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 AKAP1Q92667 903 aaKnown RBP eCLIP13.72□□□□□ -0.21
RPAIN-206ENST00000539417 NABP1Q96AH0 204 aa13.72□□□□□ -0.21
RPAIN-206ENST00000539417 FOXN4Q96NZ1 517 aa13.72□□□□□ -0.21
RPAIN-206ENST00000539417 FEVQ99581 238 aa13.72□□□□□ -0.21
RPAIN-206ENST00000539417 ALG12Q9BV10 488 aa13.72□□□□□ -0.21
RPAIN-206ENST00000539417 ST6GALNAC2Q9UJ37 374 aa13.72□□□□□ -0.21
RPAIN-206ENST00000539417 SLC22A23A1A5C7 686 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 CENPBD1B2RD01 187 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 SOX14O95416 240 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 CECR9P0C854 216 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 SDHAP31040 664 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 HOXC12P31275 282 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 IFNGR2P38484 337 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 CAPZA2P47755 286 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 CLEC12AQ5QGZ9 265 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 KLHL17Q6TDP4 642 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 PAMR1Q6UXH9 720 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 SLC22A24Q8N4F4 322 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 GIPC3Q8TF64 312 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 ERMAPQ96PL5 475 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-206ENST00000539417 NGBQ9NPG2 151 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 PDP1Q9P0J1 537 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-206ENST00000539417 CRNNQ9UBG3 495 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-206ENST00000539417 DNAJB9Q9UBS3 223 aa13.71□□□□□ -0.21
RPAIN-206ENST00000539417 A6NIZ1 184 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 GNGT2O14610 69 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 ATE1O95260 518 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 TXNDC12O95881 172 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 WNT11O96014 354 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 IGLV1-44P01699 117 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 CD79AP11912 226 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 CTLA4P16410 223 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 CALCRP30988 508 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 IDH3GP51553 393 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-206ENST00000539417 RAP1BP61224 184 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 RAP1AP62834 184 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 KPNB1Q14974 876 aaKnown RBP13.7□□□□□ -0.22
RPAIN-206ENST00000539417 SLC35F1Q5T1Q4 408 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 HDDC2Q7Z4H3 204 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 OR4Q3Q8NH05 313 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 DUS3LQ96G46 650 aaKnown RBP13.7□□□□□ -0.22
RPAIN-206ENST00000539417 TSSK2Q96PF2 358 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 SLC38A2Q96QD8 506 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 IFT27Q9BW83 186 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 DGCR6LQ9BY27 220 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 OBP2BQ9NPH6 170 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 MOKQ9UQ07 419 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 CDH10Q9Y6N8 788 aa13.7□□□□□ -0.22
RPAIN-206ENST00000539417 PRSS37A4D1T9 235 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 E7EQL1 145 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 ATP6V1G2-DDX39BF2Z307 99 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 DCTN6O00399 190 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 CIB2O75838 187 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 GPANK1O95872 356 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 IGKV3-15P01624 115 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 HOXB1P14653 301 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-206ENST00000539417 CBR1P16152 277 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 HIST1H1CP16403 213 aaKnown RBP13.69□□□□□ -0.22
RPAIN-206ENST00000539417 CD53P19397 219 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 PTAFRP25105 342 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 SLC6A6P31641 620 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 NPRL3Q12980 569 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-206ENST00000539417 FAM205BPQ63HN1 556 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 TMEM108Q6UXF1 575 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 RASSF6Q6ZTQ3 369 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 AMIGO2Q86SJ2 522 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 ZNF584Q8IVC4 421 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 LRRC18Q8N456 261 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 LINC00471Q8N535 108 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 OR4K13Q8NH42 304 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 LRTOMTQ8WZ04 291 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 SYT4Q9H2B2 425 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 FN3KQ9H479 309 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 ARMC1Q9NVT9 282 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 IL20Q9NYY1 176 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 REV1Q9UBZ9 1251 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 ITGB1BP2Q9UKP3 347 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 MGAT4BQ9UQ53 548 aa13.69□□□□□ -0.22
RPAIN-206ENST00000539417 BHLHE40O14503 412 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 HS3ST1O14792 307 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 MPZL1O95297 269 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 OR8G3PP0DMU2 310 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 GIPRP48546 466 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 ZNF84P51523 738 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 RPS6KA3P51812 740 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 SGCAQ16586 387 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 ZNF362Q5T0B9 420 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-206ENST00000539417 THEM4Q5T1C6 240 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 GPR139Q6DWJ6 353 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 UGT2A3Q6UWM9 527 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 FOXL2NBQ6ZUU3 175 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 IGFBPL1Q8WX77 278 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 PYDC1Q8WXC3 89 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 RBP7Q96R05 134 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 NMNAT3Q96T66 252 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 NUAK2Q9H093 628 aa13.68□□□□□ -0.22
RPAIN-206ENST00000539417 DENND2DQ9H6A0 471 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-206ENST00000539417 SMURF2Q9HAU4 748 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms