RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 A0A087WUU8 490 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 A0A1W2PRQ8 180 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 SLC22A23A1A5C7 686 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 A6NIZ1 184 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 EFCAB9A8MZ26 197 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 INAFM1C9JVW0 142 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 J3KTA2 159 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 DCTN3O75935 186 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 SNAP29O95721 258 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 PTHP01270 115 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 HSD17B1P14061 328 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 MAKP20794 623 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 GLRXP35754 106 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 YAP1P46937 504 aaKnown RBP9.98□□□□□ -0.81
RTN3-209ENST00000538995 RAP1BP61224 184 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 RPL27P61353 136 aaKnown RBP9.98□□□□□ -0.81
RTN3-209ENST00000538995 RAP1AP62834 184 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 GNGT1P63211 74 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 DGCR6Q14129 220 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 RAB39AQ14964 217 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 TMPRSS11FQ6ZWK6 438 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 SLC16A14Q7RTX9 510 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 OAFQ86UD1 273 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 ZNF584Q8IVC4 421 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 CDK20Q8IZL9 346 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 PGAM4Q8N0Y7 254 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 SVOPLQ8N434 492 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 LRRC75AQ8NAA5 344 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 SYT14Q8NB59 555 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 MAPK1IP1LQ8NDC0 245 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 NEU4Q8WWR8 484 aaPredicted RBP9.98□□□□□ -0.81
RTN3-209ENST00000538995 MRPL24Q96A35 216 aaKnown RBP9.98□□□□□ -0.81
RTN3-209ENST00000538995 LRRC37BQ96QE4 947 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 TNFRSF13CQ96RJ3 184 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 DOK1Q99704 481 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 PIMREGQ9BSJ6 248 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 GORASP2Q9H8Y8 452 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 NMNAT1Q9HAN9 279 aaPredicted RBP9.98□□□□□ -0.81
RTN3-209ENST00000538995 SIAEQ9HAT2 523 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 DCAF13Q9NV06 445 aaKnown RBP9.98□□□□□ -0.81
RTN3-209ENST00000538995 NDE1Q9NXR1 346 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 ADA2Q9NZK5 511 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 RHCGQ9UBD6 479 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 MAGEL2Q9UJ55 1249 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 ARL2BPQ9Y2Y0 163 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 ARFGEF3Q5TH69 2177 aa9.98□□□□□ -0.81
RTN3-209ENST00000538995 ABCA1O95477 2261 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 LOC390937A0A1W2PQ73 354 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 TMEM129A0AVI4 362 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 VWC2LB2RUY7 222 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 H1F0P07305 194 aaKnown RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 NCK1P16333 377 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 RHCEP18577 417 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 PCSK6P29122 969 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
RTN3-209ENST00000538995 VLDLRP98155 873 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 MYBPC1Q00872 1141 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 PLP2Q04941 152 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 CD47Q08722 323 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 TOP3AQ13472 1001 aaPredicted RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 FHL1Q13642 323 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 LAPTM4AQ15012 233 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 TMEM249Q2WGJ8 235 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 SPATS1Q496A3 300 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 SAMD4BQ5PRF9 694 aaKnown RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 THEM4Q5T1C6 240 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 GKAP1Q5VSY0 366 aaPredicted RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 GLYATQ6IB77 296 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 RRM2BQ7LG56 351 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 TSEN54Q7Z6J9 526 aaKnown RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 PIGWQ7Z7B1 504 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 ZNF540Q8NDQ6 660 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 RBM15BQ8NDT2 890 aaKnown RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 SLC30A7Q8NEW0 376 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 OR1J2Q8NGS2 313 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 FGFBP3Q8TAT2 258 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 ZNF519Q8TB69 540 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 SLC7A13Q8TCU3 470 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 HDAC2Q92769 488 aaKnown RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 SH3GL3Q99963 347 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 VRK1Q99986 396 aaPredicted RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 KCNN2Q9H2S1 579 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 DYNLRB1Q9NP97 96 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 NDUFAF4Q9P032 175 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 EGFL7Q9UHF1 273 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 TAGLN3Q9UI15 199 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 FAM32AQ9Y421 112 aaKnown RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 UGT2A1Q9Y4X1 527 aa9.97□□□□□ -0.81
RTN3-209ENST00000538995 ANK3Q12955 4377 aaKnown RBP9.97□□□□□ -0.81
RTN3-209ENST00000538995 TRAV27A0A087WT01 109 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 IQCMA0A1B0GVH7 501 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 M0R233 179 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 SYNGR3O43761 229 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 AHCYL1O43865 530 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 GPRIN2O60269 458 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 LY6HO94772 140 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 SLC2A10O95528 541 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 MMP7P09237 267 aaPredicted RBP9.96□□□□□ -0.82
RTN3-209ENST00000538995 PATE4P0C8F1 98 aa9.96□□□□□ -0.82
RTN3-209ENST00000538995 ITGA2P17301 1181 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms