RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 NSMAFQ92636 917 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NABP1Q96AH0 204 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ERMAPQ96PL5 475 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FEVQ99581 238 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SMURF2Q9HAU4 748 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ARMC1Q9NVT9 282 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IL20Q9NYY1 176 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PDP1Q9P0J1 537 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DNAJB9Q9UBS3 223 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 RNF115Q9Y4L5 304 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CDH10Q9Y6N8 788 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SLC22A23A1A5C7 686 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PRSS37A4D1T9 235 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 BHLHE40O14503 412 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 GNGT2O14610 69 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ARPC3O15145 178 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SOX14O95416 240 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IGKV3-15P01624 115 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CD3EP07766 207 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PATE4P0C8F1 98 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HIST1H1CP16403 213 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SLC6A6P31641 620 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CDKN2AP42771 156 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 RPS6KA3P51812 740 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ACTR3P61158 418 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ATP6AP1Q15904 470 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CLEC12AQ5QGZ9 265 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 THEM4Q5T1C6 240 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 GPR139Q6DWJ6 353 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 KLHL17Q6TDP4 642 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 TMEM108Q6UXF1 575 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PAMR1Q6UXH9 720 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CD300LDQ6UXZ3 194 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 B3GLCTQ6Y288 498 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FOXL2NBQ6ZUU3 175 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CDH24Q86UP0 819 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 AKAP1Q92667 903 aaKnown RBP eCLIP9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SLC38A2Q96QD8 506 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SH3GL3Q99963 347 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NDEL1Q9GZM8 345 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SYT4Q9H2B2 425 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 YY1AP1Q9H869 796 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 VSX1Q9NZR4 365 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 REV1Q9UBZ9 1251 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ST6GALNAC2Q9UJ37 374 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MGAT4BQ9UQ53 548 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PLEKHA6Q9Y2H5 1048 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 AP4S1Q9Y587 144 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 AKAP6Q13023 2319 aa9.85□□□□□ -0.83
TNFRSF1A-208ENST00000536194 H3BNX3 289 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DCTN6O00399 190 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 XKRYO14609 159 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HS3ST1O14792 307 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DEAF1O75398 565 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 E2F6O75461 281 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ATE1O95260 518 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SCG5P05408 212 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CECR9P0C854 216 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 OR8G3PP0DMU2 310 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CD79AP11912 226 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CBR1P16152 277 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CTLA4P16410 223 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CD53P19397 219 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PTAFRP25105 342 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CAPZA2P47755 286 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF84P51523 738 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IDH3GP51553 393 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MRPS34P82930 218 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PIGFQ07326 219 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NPRL3Q12980 569 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 C3orf36Q3SXR2 165 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NRN1LQ496H8 165 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF672Q499Z4 452 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF362Q5T0B9 420 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SHQ1Q6PI26 577 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 YTHDF3Q7Z739 585 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 AMIGO2Q86SJ2 522 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ADCK1Q86TW2 530 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CCDC36Q8IYA8 594 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PIAS4Q8N2W9 510 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 LRRC18Q8N456 261 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FAM169BQ8N8A8 192 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 OR4Q3Q8NH05 313 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 OR4K13Q8NH42 304 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FNDC8Q8TC99 324 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IGFBPL1Q8WX77 278 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PYDC1Q8WXC3 89 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 LRTOMTQ8WZ04 291 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MS4A3Q96HJ5 214 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FOXN4Q96NZ1 517 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 TSSK2Q96PF2 358 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 RBP7Q96R05 134 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IFT27Q9BW83 186 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DENND2DQ9H6A0 471 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 UBTD1Q9HAC8 227 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ROS1P08922 2347 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MAST4O15021 2626 aa9.84□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ATP6V1G2-DDX39BF2Z307 99 aa9.83□□□□□ -0.84
TNFRSF1A-208ENST00000536194 AHCYL1O43865 530 aa9.83□□□□□ -0.84
TNFRSF1A-208ENST00000536194 MMP7P09237 267 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms