RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 FBXL19-AS1Q494R0 122 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 C10orf128Q5T292 105 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 IZUMO2Q6UXV1 221 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 OR6V1Q8N148 313 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 FAM26EQ8N5C1 309 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 TCEANCQ8N8B7 351 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 TSSK2Q96PF2 358 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 ADI1Q9BV57 179 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 FN3KQ9H479 309 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 TAS2R16Q9NYV7 291 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 GPR52Q9Y2T5 361 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 FKBP7Q9Y680 259 aa13.71□□□□□ -0.21
CNN1-202ENST00000535659 NCOA6Q14686 2063 aaPredicted RBP13.71□□□□□ -0.21
CNN1-202ENST00000535659 FREM1Q5H8C1 2179 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 NKX2-6A6NCS4 301 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 FAM183AA6NL82 134 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 PRR23D1E9PI22 279 aaPredicted RBP13.7□□□□□ -0.22
CNN1-202ENST00000535659 DCTN6O00399 190 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 KHDRBS3O75525 346 aaKnown RBP13.7□□□□□ -0.22
CNN1-202ENST00000535659 PRR23D2P0DMB1 279 aaPredicted RBP13.7□□□□□ -0.22
CNN1-202ENST00000535659 CTLA4P16410 223 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 PAICSP22234 425 aaKnown RBP13.7□□□□□ -0.22
CNN1-202ENST00000535659 CAPGP40121 348 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 CD79BP40259 229 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 ZNF84P51523 738 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 SLC25A1P53007 311 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 ARF1P84077 181 aaKnown RBP13.7□□□□□ -0.22
CNN1-202ENST00000535659 TGFBR3Q03167 851 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 FAM27E3Q08E93 113 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 ETFDHQ16134 617 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 SFRP5Q5T4F7 317 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 C9orf135Q5VTT2 229 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 PLBD1Q6P4A8 553 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 ZBTB46Q86UZ6 589 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 CXorf67Q86X51 503 aaPredicted RBP13.7□□□□□ -0.22
CNN1-202ENST00000535659 CPOQ8IVL8 374 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 DEPDC4Q8N2C3 294 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 ZNF433Q8N7K0 673 aaPredicted RBP13.7□□□□□ -0.22
CNN1-202ENST00000535659 OR8J1Q8NGP2 316 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 FAM81AQ8TBF8 368 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 TMEM163Q8TC26 289 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 NSMAFQ92636 917 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 TFAP2CQ92754 450 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 UBE2FQ969M7 185 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 OTULINQ96BN8 352 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 LRRC46Q96FV0 321 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 IL4I1Q96RQ9 567 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 HDHD5Q9BXW7 423 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 NMNAT2Q9BZQ4 307 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 RERGLQ9H628 205 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 IMPAD1Q9NX62 359 aa13.7□□□□□ -0.22
CNN1-202ENST00000535659 DIDO1Q9BTC0 2240 aaKnown RBP13.7□□□□□ -0.22
CNN1-202ENST00000535659 ZNF99A8MXY4 864 aaPredicted RBP13.69□□□□□ -0.22
CNN1-202ENST00000535659 ITGA5P08648 1049 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 DNM1P34Q6PK57 102 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 STAC2Q6ZMT1 411 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 CXXC5Q7LFL8 322 aaKnown RBP13.69□□□□□ -0.22
CNN1-202ENST00000535659 OR2T4Q8NH00 348 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 HCAR1Q9BXC0 346 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 MED20Q9H944 212 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 HINT3Q9NQE9 182 aaKnown RBP13.69□□□□□ -0.22
CNN1-202ENST00000535659 GALNT8Q9NY28 637 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 ZNF226Q9NYT6 803 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 COA3Q9Y2R0 106 aaPredicted RBP13.69□□□□□ -0.22
CNN1-202ENST00000535659 CIB4A0PJX0 185 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 CLEC18AA5D8T8 446 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 M0R129 80 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 LYZL6O75951 148 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 COX5AP20674 150 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 GUCA1AP43080 201 aaPredicted RBP13.69□□□□□ -0.22
CNN1-202ENST00000535659 HSPA13P48723 471 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 SH3BGRP55822 239 aaPredicted RBP13.69□□□□□ -0.22
CNN1-202ENST00000535659 DBPQ10586 325 aaPredicted RBP13.69□□□□□ -0.22
CNN1-202ENST00000535659 IL18R1Q13478 541 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 GABRA6Q16445 453 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 C6orf52Q5T4I8 152 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 CLEC18BQ6UXF7 455 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 ZNF627Q7L945 461 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 CLEC18CQ8NCF0 446 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 OR9Q1Q8NGQ5 310 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 RHOXF1Q8NHV9 184 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 SSC4DQ8WTU2 575 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 RNASE6Q93091 150 aaKnown RBP13.69□□□□□ -0.22
CNN1-202ENST00000535659 MUS81Q96NY9 551 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 FOXB1Q99853 325 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 SEC61A2Q9H9S3 476 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 H2AFY2Q9P0M6 372 aaPredicted RBP13.69□□□□□ -0.22
CNN1-202ENST00000535659 UGT2A1Q9Y4X1 527 aa13.69□□□□□ -0.22
CNN1-202ENST00000535659 HECTD1Q9ULT8 2610 aa13.68□□□□□ -0.22
CNN1-202ENST00000535659 IGLV1-36A0A0B4J1U3 117 aa13.68□□□□□ -0.22
CNN1-202ENST00000535659 C16orf97H3BN30 126 aa13.68□□□□□ -0.22
CNN1-202ENST00000535659 MPZL2O60487 215 aa13.68□□□□□ -0.22
CNN1-202ENST00000535659 CLIC3O95833 236 aa13.68□□□□□ -0.22
CNN1-202ENST00000535659 GYPBP06028 91 aa13.68□□□□□ -0.22
CNN1-202ENST00000535659 SPI1P17947 270 aa13.68□□□□□ -0.22
CNN1-202ENST00000535659 PSMB1P20618 241 aaKnown RBP13.68□□□□□ -0.22
CNN1-202ENST00000535659 LAP3P28838 519 aa13.68□□□□□ -0.22
CNN1-202ENST00000535659 CENPAP49450 140 aa13.68□□□□□ -0.22
CNN1-202ENST00000535659 SNRPGP62308 76 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms