RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 IGKV1D-43A0A0B4J1Z2 117 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 LOC390937A0A1W2PQ73 354 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 VSTM5A8MXK1 200 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 NDUFAB1O14561 156 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 SNX3O60493 162 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 ZNF682O95780 498 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 SERPINA1P01009 418 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 MMP7P09237 267 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-215ENST00000534307 IFI30P13284 250 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 USF1P22415 310 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-215ENST00000534307 PRDX6P30041 224 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 GLRXP35754 106 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 NR4A2P43354 598 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 PSME3P61289 254 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 MYBPC1Q00872 1141 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 PRKCDQ05655 676 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 IFI44LQ53G44 452 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 ALG10Q5BKT4 473 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 DPPA2Q7Z7J5 298 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 NRMQ8IXM6 262 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 ZCCHC24Q8N2G6 241 aaKnown RBP12.1□□□□□ -0.47
SF3B2-215ENST00000534307 PAQR4Q8N4S7 273 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-215ENST00000534307 ACOT11Q8WXI4 607 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-215ENST00000534307 NABP1Q96AH0 204 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 CMTM5Q96DZ9 223 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 HSH2DQ96JZ2 352 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 FNDC11Q9BVV2 318 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 STX18Q9P2W9 335 aaKnown RBP12.1□□□□□ -0.47
SF3B2-215ENST00000534307 CMAHPQ9Y471 501 aa12.1□□□□□ -0.47
SF3B2-215ENST00000534307 A0A087WUU8 490 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 FARS2O95363 451 aaKnown RBP12.09□□□□□ -0.47
SF3B2-215ENST00000534307 SLC2A10O95528 541 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 IGHV4-31P0DP07 118 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 NCK1P16333 377 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 IFNA8P32881 189 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 ZNF84P51523 738 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
SF3B2-215ENST00000534307 TAF11Q15544 211 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 SLC25A47Q6Q0C1 308 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 MEX3DQ86XN8 651 aaKnown RBP12.09□□□□□ -0.47
SF3B2-215ENST00000534307 HIPK1Q86Z02 1210 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 RNF113BQ8IZP6 322 aaKnown RBP12.09□□□□□ -0.47
SF3B2-215ENST00000534307 FAM156AQ8NDB6 213 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 RBM15BQ8NDT2 890 aaKnown RBP12.09□□□□□ -0.47
SF3B2-215ENST00000534307 ZNF519Q8TB69 540 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 FOXN4Q96NZ1 517 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 KCTD14Q9BQ13 255 aaPredicted RBP12.09□□□□□ -0.47
SF3B2-215ENST00000534307 PIMREGQ9BSJ6 248 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 RAB1BQ9H0U4 201 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 YAE1D1Q9NRH1 226 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 SPEF1Q9Y4P9 236 aa12.09□□□□□ -0.47
SF3B2-215ENST00000534307 IGHV4-61A0A0C4DH41 118 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 A8MV72 311 aaPredicted RBP12.08□□□□□ -0.48
SF3B2-215ENST00000534307 CDC42EP2O14613 210 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 GSTA4O15217 222 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 MGRN1O60291 552 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 SNAP29O95721 258 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
SF3B2-215ENST00000534307 GIFP27352 417 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 RPL27P61353 136 aaKnown RBP12.08□□□□□ -0.48
SF3B2-215ENST00000534307 FMODQ06828 376 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 SLC36A2Q495M3 483 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 TBPL2Q6SJ96 375 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 MBOAT2Q6ZWT7 520 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 SLC16A14Q7RTX9 510 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 IGFN1Q86VF2 1251 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 LRP11Q86VZ4 500 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 CLDN22Q8N7P3 220 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 SLC30A7Q8NEW0 376 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 OR13C2Q8NGS9 318 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 SLC7A13Q8TCU3 470 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 NEU4Q8WWR8 484 aaPredicted RBP12.08□□□□□ -0.48
SF3B2-215ENST00000534307 C7orf34Q96L11 122 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 TSPAN32Q96QS1 320 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 FAM107BQ9H098 131 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 ANKRD19PQ9H560 264 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 NMNAT1Q9HAN9 279 aaPredicted RBP12.08□□□□□ -0.48
SF3B2-215ENST00000534307 SIAEQ9HAT2 523 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 SPAG4Q9NPE6 437 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
SF3B2-215ENST00000534307 SLC7A8Q9UHI5 535 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 ENPP4Q9Y6X5 453 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 MALRD1Q5VYJ5 2156 aa12.08□□□□□ -0.48
SF3B2-215ENST00000534307 TRAV27A0A087WT01 109 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 A0A1W2PRQ8 180 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 SH3PXD2BA1X283 911 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 EFCAB9A8MZ26 197 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 SYNGR3O43761 229 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 STAMBPO95630 424 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 ADRA2AP08913 450 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 SAGP10523 405 aaPredicted RBP12.07□□□□□ -0.48
SF3B2-215ENST00000534307 DAOP14920 347 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 CDAP32320 146 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 SLC9A3P48764 834 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 CTXN1P60606 82 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 RPS23P62266 143 aaKnown RBP12.07□□□□□ -0.48
SF3B2-215ENST00000534307 GNGT1P63211 74 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 GALK2Q01415 458 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms