RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 DVL1P1P54792 670 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-207ENST00000531727 MRPS11P82912 194 aaKnown RBP14.42□□□□□ -0.1
CPSF1-207ENST00000531727 MYBPC1Q00872 1141 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 SRSF2Q01130 221 aaKnown RBP14.42□□□□□ -0.1
CPSF1-207ENST00000531727 COQ5Q5HYK3 327 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 DEF8Q6ZN54 512 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 SYT14Q8NB59 555 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 TMEM239Q8WW34 195 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 SGTBQ96EQ0 304 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 CDH20Q9HBT6 801 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 INIPQ9NRY2 104 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 ARGLU1Q9NWB6 273 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-207ENST00000531727 RIMS3Q9UJD0 308 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 BBIP1A8MTZ0 92 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 SHOX2O60902 331 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-207ENST00000531727 TRMUO75648 421 aaKnown RBP14.41□□□□□ -0.1
CPSF1-207ENST00000531727 NCR1O76036 304 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 NPPAP01160 153 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 TSPAN19P0C672 248 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 THRBP10828 461 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 ZNF250P15622 560 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 ACADSP16219 412 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 AQP2P41181 271 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 ZNF133P52736 654 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-207ENST00000531727 SELENOVP59797 346 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 PIN1Q13526 163 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-207ENST00000531727 NKPD1Q17RQ9 610 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 TBC1D28Q2M2D7 210 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 MMEL1Q495T6 779 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 C10orf128Q5T292 105 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 ERICH5Q6P6B1 374 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 RBM15BQ8NDT2 890 aaKnown RBP14.41□□□□□ -0.1
CPSF1-207ENST00000531727 OR1J2Q8NGS2 313 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 CLDND2Q8NHS1 167 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 LIPHQ8WWY8 451 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 YIPF5Q969M3 257 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 ZNF583Q96ND8 569 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 RACGAP1Q9H0H5 632 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 ZNF275Q9NSD4 429 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-207ENST00000531727 C20orf141Q9NUB4 165 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 TAAR3PQ9P1P4 343 aa14.41□□□□□ -0.1
CPSF1-207ENST00000531727 STX18Q9P2W9 335 aaKnown RBP14.41□□□□□ -0.1
CPSF1-207ENST00000531727 IGLV3-9A0A075B6K5 115 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 IQCMA0A1B0GVH7 501 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 NPIPB13A6NJU9 1138 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 B4DSR2 109 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 NPIPB4C9JG80 1138 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 MRASO14807 208 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 MGRN1O60291 552 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 CLPTM1O96005 669 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 IFNA14P01570 189 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 MMP7P09237 267 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-207ENST00000531727 TROVE2P10155 538 aaKnown RBP eCLIP14.4□□□□□ -0.1
CPSF1-207ENST00000531727 SAGP10523 405 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-207ENST00000531727 H2AFXP16104 143 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-207ENST00000531727 PCMT1P22061 227 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 SRP14P37108 136 aaKnown RBP14.4□□□□□ -0.1
CPSF1-207ENST00000531727 OR1E2P47887 323 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 TMEM33P57088 247 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 KLF3P57682 345 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-207ENST00000531727 PLP2Q04941 152 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 KLF10Q13118 480 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 ALKBH6Q3KRA9 238 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 ARMC4Q5T2S8 1044 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 LIPNQ5VXI9 398 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 RFLNBQ8N5W9 214 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 MOSPD2Q8NHP6 518 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 ZNF519Q8TB69 540 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 SYNPRQ8TBG9 265 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 C10orf82Q8WW14 230 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 ZNF416Q9BWM5 594 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 LRMDAQ9H2I8 198 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 OR51B6Q9H340 312 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 GPR160Q9UJ42 338 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 MED31Q9Y3C7 131 aa14.4□□□□□ -0.1
CPSF1-207ENST00000531727 C17orf100A8MU93 164 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 RP2O75695 350 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 TFP02787 698 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 LCKP06239 509 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 RAD52P43351 418 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 MAGEB1P43366 347 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 UCP2P55851 309 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 ERVS71-1P61550 626 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 MRPS34P82930 218 aaKnown RBP14.39□□□□□ -0.11
CPSF1-207ENST00000531727 MAPRE2Q15555 327 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 CYBRD1Q53TN4 286 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 GLCCI1Q86VQ1 547 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 LRRC18Q8N456 261 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 C11orf40Q8WZ69 217 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 TSPAN32Q96QS1 320 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 BCL2L14Q9BZR8 327 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 NARFLQ9H6Q4 476 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 SIAEQ9HAT2 523 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 SMURF2Q9HAU4 748 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 HINT3Q9NQE9 182 aaKnown RBP14.39□□□□□ -0.11
CPSF1-207ENST00000531727 SAR1AQ9NR31 198 aa14.39□□□□□ -0.11
CPSF1-207ENST00000531727 FAM220BPB1ANY3 271 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 WNT9BO14905 357 aa14.38□□□□□ -0.11
CPSF1-207ENST00000531727 PPIHO43447 177 aaKnown RBP14.38□□□□□ -0.11
CPSF1-207ENST00000531727 TCF21O43680 179 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms