RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 NPPAP01160 153 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 TSPAN19P0C672 248 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 FAM157BP0CG42 384 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 ACADSP16219 412 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 AQP2P41181 271 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 GPR6P46095 362 aaPredicted RBP13.52□□□□□ -0.25
CPSF1-205ENST00000531042 ZNF84P51523 738 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 DVL1P1P54792 670 aaPredicted RBP13.52□□□□□ -0.25
CPSF1-205ENST00000531042 MRPS11P82912 194 aaKnown RBP13.52□□□□□ -0.25
CPSF1-205ENST00000531042 PIN1Q13526 163 aaPredicted RBP13.52□□□□□ -0.25
CPSF1-205ENST00000531042 COQ5Q5HYK3 327 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 ERICH5Q6P6B1 374 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 DEF8Q6ZN54 512 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 SYT14Q8NB59 555 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 TMEM239Q8WW34 195 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 LIPHQ8WWY8 451 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 YIPF5Q969M3 257 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 SGTBQ96EQ0 304 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 ZNF583Q96ND8 569 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 RACGAP1Q9H0H5 632 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 CDH20Q9HBT6 801 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 INIPQ9NRY2 104 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 C20orf141Q9NUB4 165 aa13.52□□□□□ -0.25
CPSF1-205ENST00000531042 IGLV3-9A0A075B6K5 115 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 B4DSR2 109 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 MGRN1O60291 552 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 NCR1O76036 304 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 CLPTM1O96005 669 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 PTHP01270 115 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 MMP7P09237 267 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-205ENST00000531042 ZNF250P15622 560 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 H2AFXP16104 143 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-205ENST00000531042 OR1E2P47887 323 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 DAP3P51398 398 aaKnown RBP13.51□□□□□ -0.25
CPSF1-205ENST00000531042 ZNF133P52736 654 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-205ENST00000531042 TMEM33P57088 247 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 SELENOVP59797 346 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 KLF10Q13118 480 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 NKPD1Q17RQ9 610 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 TBC1D28Q2M2D7 210 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 ALKBH6Q3KRA9 238 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 MMEL1Q495T6 779 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 C10orf128Q5T292 105 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 HDDC2Q7Z4H3 204 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 RBM15BQ8NDT2 890 aaKnown RBP13.51□□□□□ -0.25
CPSF1-205ENST00000531042 OR1J2Q8NGS2 313 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 MOSPD2Q8NHP6 518 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 CLDND2Q8NHS1 167 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 ZNF519Q8TB69 540 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 SYNPRQ8TBG9 265 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 C10orf82Q8WW14 230 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 OR51B6Q9H340 312 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 ZNF275Q9NSD4 429 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-205ENST00000531042 MRGBPQ9NV56 204 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 ARGLU1Q9NWB6 273 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-205ENST00000531042 TAAR3PQ9P1P4 343 aa13.51□□□□□ -0.25
CPSF1-205ENST00000531042 IQCMA0A1B0GVH7 501 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 BBIP1A8MTZ0 92 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 MRASO14807 208 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 WNT9BO14905 357 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 IFNA14P01570 189 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 LCKP06239 509 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 THRBP10828 461 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 SRP14P37108 136 aaKnown RBP13.5□□□□□ -0.25
CPSF1-205ENST00000531042 RAD52P43351 418 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 MAGEB1P43366 347 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 UCP2P55851 309 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 KLF3P57682 345 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-205ENST00000531042 ERVS71-1P61550 626 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 PLP2Q04941 152 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 ARMC4Q5T2S8 1044 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 LIPNQ5VXI9 398 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 LRRC18Q8N456 261 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 RFLNBQ8N5W9 214 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 C11orf40Q8WZ69 217 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 TSPAN32Q96QS1 320 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 BCL2L14Q9BZR8 327 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 LRMDAQ9H2I8 198 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 NARFLQ9H6Q4 476 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 SIAEQ9HAT2 523 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 HINT3Q9NQE9 182 aaKnown RBP13.5□□□□□ -0.25
CPSF1-205ENST00000531042 STX18Q9P2W9 335 aaKnown RBP13.5□□□□□ -0.25
CPSF1-205ENST00000531042 GPR160Q9UJ42 338 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 MED31Q9Y3C7 131 aa13.5□□□□□ -0.25
CPSF1-205ENST00000531042 NPIPB13A6NJU9 1138 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 C17orf100A8MU93 164 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 FAM157AC9JC47 383 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 NPIPB4C9JG80 1138 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 PPIHO43447 177 aaKnown RBP13.49□□□□□ -0.25
CPSF1-205ENST00000531042 RP2O75695 350 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 SASH3O75995 380 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 SLC2A10O95528 541 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 TFP02787 698 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 TROVE2P10155 538 aaKnown RBP eCLIP13.49□□□□□ -0.258e-9■■■■□ 22.1
CPSF1-205ENST00000531042 SAGP10523 405 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-205ENST00000531042 PCMT1P22061 227 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 KDELR2P33947 212 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 ARFIP2P53365 341 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 MRPS34P82930 218 aaKnown RBP13.49□□□□□ -0.25
CPSF1-205ENST00000531042 LAPTM4AQ15012 233 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms