RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 PDZD2O15018 2839 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 PRR14LQ5THK1 2151 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 A0A096LPE4 126 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 A0A1W2PPZ6 126 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 A0A1W2PR80 420 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 SH3D21A4FU49 640 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 OR5H1A6NKK0 313 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 ALPLP05186 524 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 GRK5P34947 590 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 KIR2DL3P43628 341 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 GIPRP48546 466 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 ZNF133P52736 654 aaPredicted RBP12.28□□□□□ -0.44
USF1-209ENST00000529476 SH3BGRP55822 239 aaPredicted RBP12.28□□□□□ -0.44
USF1-209ENST00000529476 CDK5Q00535 292 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.28□□□□□ -0.44
USF1-209ENST00000529476 DBPQ10586 325 aaPredicted RBP12.28□□□□□ -0.44
USF1-209ENST00000529476 TRIP10Q15642 601 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 TBRG1Q3YBR2 411 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 HIKESHIQ53FT3 197 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 THEM4Q5T1C6 240 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 C10orf128Q5T292 105 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 TMEM236Q5W0B7 351 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 OR7E24Q6IFN5 339 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 ACSM5Q6NUN0 579 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 LEG1Q6P5S2 330 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 ANKRD16Q6P6B7 361 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 SLC25A47Q6Q0C1 308 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 C1orf162Q8NEQ5 155 aaPredicted RBP12.28□□□□□ -0.44
USF1-209ENST00000529476 FNDC8Q8TC99 324 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 HTRA1Q92743 480 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 BCL2L2Q92843 193 aaPredicted RBP12.28□□□□□ -0.44
USF1-209ENST00000529476 EME1Q96AY2 570 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 ZC3HAV1LQ96H79 300 aaKnown RBP12.28□□□□□ -0.44
USF1-209ENST00000529476 FOXB1Q99853 325 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 SPOCK3Q9BQ16 436 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 MED18Q9BUE0 208 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 OR10A4Q9H209 315 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 SYT4Q9H2B2 425 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 FN3KQ9H479 309 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 DCLRE1BQ9H816 532 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 USE1Q9NZ43 259 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 VSX1Q9NZR4 365 aaPredicted RBP12.28□□□□□ -0.44
USF1-209ENST00000529476 CRIM1Q9NZV1 1036 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 NKX1-2Q9UD57 310 aaPredicted RBP12.28□□□□□ -0.44
USF1-209ENST00000529476 NDRG3Q9UGV2 375 aa12.28□□□□□ -0.44
USF1-209ENST00000529476 AHCYL1O43865 530 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 THBDP07204 575 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 NR2C1P13056 603 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 B4GALT1P15291 398 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 PPP3CBP16298 524 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 CTLA4P16410 223 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 EPHA2P29317 976 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 POLR2IP36954 125 aaKnown RBP12.27□□□□□ -0.45
USF1-209ENST00000529476 PEX19P40855 299 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 ZNF84P51523 738 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 ALDH3A2P51648 485 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 ESRRGP62508 458 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 TAB1Q15750 504 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 ETFDHQ16134 617 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 ZNF362Q5T0B9 420 aaPredicted RBP12.27□□□□□ -0.45
USF1-209ENST00000529476 LPCAT4Q643R3 524 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 ALKBH2Q6NS38 261 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 KLHL24Q6TFL4 600 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 ZNF813Q6ZN06 617 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 ZBTB49Q6ZSB9 765 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 WDR31Q8NA23 367 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 CYB561A3Q8NBI2 242 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 NPEPL1Q8NDH3 523 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 OR52N5Q8NH56 324 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 TSSK2Q96PF2 358 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 RIBC2Q9H4K1 309 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 RERGLQ9H628 205 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 SLC25A19Q9HC21 320 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 SLC17A5Q9NRA2 495 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 TMEM38BQ9NVV0 291 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 UGT2A1Q9Y4X1 527 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 CELSR1Q9NYQ6 3014 aa12.27□□□□□ -0.45
USF1-209ENST00000529476 ANKHD1Q8IWZ3 2542 aaKnown RBP12.27□□□□□ -0.45
USF1-209ENST00000529476 HIVEP1P15822 2718 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 OR6C68A6NDL8 312 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 SLC16A7O60669 478 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 RENP00797 406 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 COX6B1P14854 86 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 PEX2P28328 305 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 CDAP32320 146 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 TUBA1BP68363 451 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 TUBA4AP68366 448 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 CRMP1Q14194 572 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 PTGES3Q15185 160 aaKnown RBP12.26□□□□□ -0.45
USF1-209ENST00000529476 LRRC36Q1X8D7 754 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 TIMM23BQ5SRD1 257 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 TUBA1AQ71U36 451 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 ZNF627Q7L945 461 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 WFDC8Q8IUA0 241 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 C17orf78Q8N4C9 275 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 SLC37A3Q8NCC5 494 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 HSD17B8Q92506 261 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 BOD1Q96IK1 185 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 DACH2Q96NX9 599 aa12.26□□□□□ -0.45
USF1-209ENST00000529476 FOXN4Q96NZ1 517 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms