RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ERVK-6Q9BXR3 956 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 ATG10Q9H0Y0 220 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 DPH5Q9H2P9 285 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 VCX3BQ9H321 246 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 SYNDIG1Q9H7V2 258 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 COG4Q9H9E3 785 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CHRAC1Q9NRG0 131 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CENPMQ9NSP4 180 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 BFARQ9NZS9 450 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 SLC23A2Q9UGH3 650 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 TP53TG3Q9ULZ0 132 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 FZR1Q9UM11 496 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CHMP2BQ9UQN3 213 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 SNX24Q9Y343 169 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 DHRS7Q9Y394 339 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CACNA1AO00555 2505 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 MYO15AQ9UKN7 3530 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CACNA1HO95180 2353 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 GPR179Q6PRD1 2367 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 DMDP11532 3685 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 ZFC3H1O60293 1989 aaKnown RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 IGHV3OR16-12A0A075B7B8 117 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 CTAGE15A4D2H0 777 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 PDZK1P1A8MUH7 402 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 D6RAR5 112 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 E7ESA3 106 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 NPIPA2E9PIF3 369 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 H3BMH7 237 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 E2F3O00716 465 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 NUDT21O43809 227 aaKnown RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 OR1I1O60431 355 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 KLHL41O60662 606 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 SRSF10O75494 262 aaKnown RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 POP7O75817 140 aaKnown RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 VAPBO95292 243 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 TRIM16O95361 564 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 GP1BAP07359 652 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 OR56A5P0C7T3 313 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 RALBP11234 206 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 ATP1B2P14415 290 aaPredicted RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 PGAM1P18669 254 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 KLK2P20151 261 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 IDSP22304 550 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 RPS3P23396 243 aaKnown RBP eCLIP2.94□□□□□ -1.94
CD44-219ENST00000525685 PRDX6P30041 224 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 S100A5P33763 92 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 NSG1P42857 185 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 SLC1A2P43004 574 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 DUSP3P51452 185 aaPredicted RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 ARHGDIBP52566 201 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 UBE2IP63279 158 aaKnown RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 ILKQ13418 452 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 LTB4RQ15722 352 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 GSG1Q2KHT4 349 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 SPANXN3Q5MJ09 141 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 HES3Q5TGS1 186 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 MEDAGQ5VYS4 303 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 STEAP4Q687X5 459 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 DUPD1Q68J44 220 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 ZNF470Q6ECI4 717 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 BAIAP2L2Q6UXY1 529 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 Q6ZR54 194 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 CENPUQ71F23 418 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 CTAGE6Q86UF2 777 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 AMZ2Q86W34 360 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 KDM8Q8N371 416 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 MMGT1Q8N4V1 131 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 CLDN19Q8N6F1 224 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 LINC00612Q8N6U2 182 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 BBOF1Q8ND07 529 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 NAT6Q93015 286 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 ART4Q93070 314 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 NTNG2Q96CW9 530 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 CERS2Q96G23 380 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 DCUN1D1Q96GG9 259 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 ZNF514Q96K75 400 aaPredicted RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 C9orf85Q96MD7 179 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 TTC25Q96NG3 672 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 EBNA1BP2Q99848 306 aaKnown RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 ERP44Q9BS26 406 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 CARD6Q9BX69 1037 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 RAB17Q9H0T7 212 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 OR52A5Q9H2C5 316 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 ZNF446Q9NWS9 450 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 FAM120CQ9NX05 1096 aaKnown RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 UBAP1Q9NZ09 502 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 ZNF490Q9ULM2 529 aaPredicted RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 PSMD13Q9UNM6 376 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 KLHDC2Q9Y2U9 406 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 MAD1L1Q9Y6D9 718 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 V9GYY5 206 aaPredicted RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 CACNA1EQ15878 2313 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 PTPRBP23467 1997 aa2.94□□□□□ -1.94
CD44-219ENST00000525685 TDRD6O60522 2096 aaKnown RBP2.94□□□□□ -1.94
CD44-219ENST00000525685 ASCC3Q8N3C0 2202 aaKnown RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 AGRNO00468 2067 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 IGHV1OR21-1A0A087WYE8 117 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 SLC5A10A0PJK1 596 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 KRT87PA6NCN2 255 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms