RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 Q96M85 177 aa13.18□□□□□ -0.3
SF3B2-202ENST00000524475 SLC38A2Q96QD8 506 aa13.18□□□□□ -0.3
SF3B2-202ENST00000524475 SNX18Q96RF0 628 aa13.18□□□□□ -0.3
SF3B2-202ENST00000524475 ZNF224Q9NZL3 707 aa13.18□□□□□ -0.3
SF3B2-202ENST00000524475 FBXL3Q9UKT7 428 aa13.18□□□□□ -0.3
SF3B2-202ENST00000524475 PRSS37A4D1T9 235 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 SHISA9B4DS77 424 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 ABCD4O14678 606 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 HS3ST1O14792 307 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
SF3B2-202ENST00000524475 UBL3O95164 117 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 FARS2O95363 451 aaKnown RBP13.17□□□□□ -0.3
SF3B2-202ENST00000524475 GASTP01350 101 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 RAF1P04049 648 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 OR8G3PP0DMU2 310 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 B4GALT1P15291 398 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 NPR2P20594 1047 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 MRPS34P82930 218 aaKnown RBP13.17□□□□□ -0.3
SF3B2-202ENST00000524475 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
SF3B2-202ENST00000524475 ZNF672Q499Z4 452 aaPredicted RBP13.17□□□□□ -0.3
SF3B2-202ENST00000524475 ALKBH2Q6NS38 261 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 SLC22A24Q8N4F4 322 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 ZNF611Q8N823 705 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 IL17RDQ8NFM7 739 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 OR10G2Q8NGC3 310 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 GIPC3Q8TF64 312 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 VSX1Q9NZR4 365 aaPredicted RBP13.17□□□□□ -0.3
SF3B2-202ENST00000524475 UGT2A1Q9Y4X1 527 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 U3KQV3 271 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 DSCAMO60469 2012 aa13.17□□□□□ -0.3
SF3B2-202ENST00000524475 VPS13CQ709C8 3753 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 IGKV1D-43A0A0B4J1Z2 117 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 IGHV1-18A0A0C4DH31 117 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 SLC22A23A1A5C7 686 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 ZNF503-AS2A6NEH8 195 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 M0R1B8 84 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 GNGT2O14610 69 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 ARHGEF9O43307 516 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 ATE1O95260 518 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 PLAUP00749 431 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 FCGR1AP12314 374 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 PPP1R8Q12972 351 aaKnown RBP13.16□□□□□ -0.3
SF3B2-202ENST00000524475 CCNIQ14094 377 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 GSG1Q2KHT4 349 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 OR52L1Q8NGH7 329 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 LILRB1Q8NHL6 650 aaPredicted RBP13.16□□□□□ -0.3
SF3B2-202ENST00000524475 IGFBPL1Q8WX77 278 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 AKAP1Q92667 903 aaKnown RBP eCLIP13.16□□□□□ -0.3
SF3B2-202ENST00000524475 NABP1Q96AH0 204 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 ZNF75AQ96N20 296 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 SIAEQ9HAT2 523 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 IER3IP1Q9Y5U9 82 aa13.16□□□□□ -0.3
SF3B2-202ENST00000524475 TEX13CA0A0J9YWL9 993 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 SEC14L2O76054 403 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 SLC2A10O95528 541 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 CD53P19397 219 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 DNASE1P24855 282 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 ACTR3P61158 418 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 MYBPC1Q00872 1141 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 FMODQ06828 376 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 SHQ1Q6PI26 577 aaKnown RBP13.15□□□□□ -0.3
SF3B2-202ENST00000524475 MDP1Q86V88 176 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 SKA3Q8IX90 412 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 KBTBD8Q8NFY9 601 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 NRGNQ92686 78 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 FBXW5Q969U6 566 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 RASD2Q96D21 266 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 SAMD8Q96LT4 415 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 WACQ9BTA9 647 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 GRIP2Q9C0E4 1043 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 LIME1Q9H400 295 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 NTN4Q9HB63 628 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 AP4S1Q9Y587 144 aa13.15□□□□□ -0.3
SF3B2-202ENST00000524475 BHLHE40O14503 412 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 E2F6O75461 281 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 PPP1R3DO95685 299 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 HLA-HP01893 362 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 CECR9P0C854 216 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 ANXA8P13928 327 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 ZNF14P17017 642 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-202ENST00000524475 ARHGDIAP52565 204 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 IST1P53990 364 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 CDH11P55287 796 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 TUBA1BP68363 451 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 TUBA4AP68366 448 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 NAAAQ02083 359 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 KEAP1Q14145 624 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 ATP6AP1Q15904 470 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 SLC36A2Q495M3 483 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 FAM27BQ5VT28 67 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 PTCHD4Q6ZW05 846 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 TUBA1AQ71U36 451 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 TMEM179BQ7Z7N9 219 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 DNAJC9Q8WXX5 260 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 PIGTQ969N2 578 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 ERMAPQ96PL5 475 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-202ENST00000524475 FEVQ99581 238 aa13.14□□□□□ -0.31
SF3B2-202ENST00000524475 IFT27Q9BW83 186 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms