RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SLC41A3Q96GZ6 507 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 GPR61Q9BZJ8 451 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 IFI27L2Q9H2X8 130 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 VPS37BQ9H9H4 285 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 NMRAL1Q9HBL8 299 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 EXD2Q9NVH0 621 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 SLC39A1Q9NY26 324 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 TBX21Q9UL17 535 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 CFL2Q9Y281 166 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 PIGLQ9Y2B2 252 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 CAB39Q9Y376 341 aaPredicted RBP3.16□□□□□ -1.9
SKP1-208ENST00000521216 CTTNBP2Q8WZ74 1663 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 MYO3BQ8WXR4 1341 aa3.16□□□□□ -1.9
SKP1-208ENST00000521216 POLA1P09884 1462 aaPredicted RBP3.16□□□□□ -1.9
SKP1-208ENST00000521216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.15□□□□□ -1.91e-8■■■□□ 18.6
SKP1-208ENST00000521216 CIB4A0PJX0 185 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 PRSS37A4D1T9 235 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 SNTNA6NMZ2 147 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 PEX7O00628 323 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 KMOO15229 486 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 FCMRO60667 390 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 MED6O75586 246 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 UBTFL1P0CB47 393 aaPredicted RBP3.15□□□□□ -1.91
SKP1-208ENST00000521216 M6PRP20645 277 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 CD1CP29017 333 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 HAAOP46952 286 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 LINC00315P59091 139 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 PFN3P60673 137 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 CHIT1Q13231 466 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 STK11Q15831 433 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 KCTD19Q17RG1 926 aaPredicted RBP3.15□□□□□ -1.91
SKP1-208ENST00000521216 COA6Q5JTJ3 125 aaKnown RBP3.15□□□□□ -1.91
SKP1-208ENST00000521216 TMEM53Q6P2H8 277 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 C3orf62Q6ZUJ4 267 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 NKAIN4Q8IVV8 208 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 LRRC75A-AS1Q8N1F1 130 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 ARHGAP18Q8N392 663 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 TPRX1Q8N7U7 411 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 BBOF1Q8ND07 529 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 BHLHE23Q8NDY6 225 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 VN1R2Q8NFZ6 395 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 ZNF596Q8TC21 504 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 GEMIN6Q8WXD5 167 aaKnown RBP3.15□□□□□ -1.91
SKP1-208ENST00000521216 KIFAP3Q92845 792 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 SGK3Q96BR1 496 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 IFT74Q96LB3 600 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 HSFY1Q96LI6 401 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 OR8B4Q96RC9 309 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 SORT1Q99523 831 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 API5Q9BZZ5 524 aaKnown RBP3.15□□□□□ -1.91
SKP1-208ENST00000521216 DRC3Q9H069 523 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 TPK1Q9H3S4 243 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 VCX3AQ9NNX9 186 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 CTPS2Q9NRF8 586 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 XCL2Q9UBD3 114 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 GGA2Q9UJY4 613 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 FADS3Q9Y5Q0 445 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 MYOM3Q5VTT5 1437 aa3.15□□□□□ -1.91
SKP1-208ENST00000521216 SCAF11Q99590 1463 aaKnown RBP3.15□□□□□ -1.91
SKP1-208ENST00000521216 MSH6P52701 1360 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 IGLV11-55A0A075B6I3 123 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 OR5K4A6NMS3 321 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 CCDC169A6NNP5 214 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 SPECC1L-ADORA2AF8WAN1 911 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 XKRYO14609 159 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 TRDMT1O14717 391 aaKnown RBP3.14□□□□□ -1.91
SKP1-208ENST00000521216 SPOPO43791 374 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 MGRN1O60291 552 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 PALMO75781 387 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 OR7A10O76100 309 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 SNX4O95219 450 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 TSPAN12O95859 305 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 KRT14P02533 472 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 CTRB1P17538 263 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 ALDH3A1P30838 453 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 ATP5C1P36542 298 aaKnown RBP3.14□□□□□ -1.91
SKP1-208ENST00000521216 CBX5P45973 191 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 UBE2AP49459 152 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 FGF8P55075 233 aaPredicted RBP3.14□□□□□ -1.91
SKP1-208ENST00000521216 SEC61GP60059 68 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 ACTR1AP61163 376 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 S100A12P80511 92 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 GBE1Q04446 702 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 SLAQ13239 276 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 AQP6Q13520 282 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 DGUOKQ16854 277 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 DEFB116Q30KQ4 102 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 TRIM40Q6P9F5 258 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 KDM7AQ6ZMT4 941 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 SLC51BQ86UW2 128 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 TBC1D21Q8IYX1 336 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 OR2G2Q8NGZ5 317 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 ENKURQ8TC29 256 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 ACTRT1Q8TDG2 376 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 STARD8Q92502 1023 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 PEX13Q92968 403 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 PLEKHA8Q96JA3 519 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 FOPNLQ96NB1 174 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 CNN2Q99439 309 aaKnown RBP3.14□□□□□ -1.91
SKP1-208ENST00000521216 UCK1Q9HA47 277 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms