RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 OR52I2Q8NH67 350 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 GCDHQ92947 438 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 CNRIP1Q96F85 164 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC41A2Q96JW4 573 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC46A1Q96NT5 459 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 NRTNQ99748 197 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 HCAR1Q9BXC0 346 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZMAT3Q9HA38 289 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 TMED7Q9Y3B3 224 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 KRBOX1C9JBD0 128 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 FTCDNL1E5RQL4 147 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 SIX6O95475 246 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 CEACAM5P06731 702 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 CXCL3P19876 107 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 AGTR1P30556 359 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 TSFMP43897 325 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 BTG2P78543 158 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC25A30Q5SVS4 291 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 AADACL4Q5VUY2 407 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 HAGHLQ6PII5 290 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 TSSK4Q6SA08 328 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 FAM57BQ71RH2 274 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 NLRC3Q7RTR2 1065 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR11H7Q8NGC8 314 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZG16BQ96DA0 208 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 TSNAXQ99598 290 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 RPP25Q9BUL9 199 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 IL20Q9NYY1 176 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 CCDC88CQ9P219 2028 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 GPRIN2O60269 458 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 NID1P14543 1247 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 RAD52P43351 418 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 AGERQ15109 404 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 CNEP1R1Q8N9A8 125 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 SCGB1C1Q8TD33 95 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ST8SIA4Q92187 359 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 RRNAD1Q96FB5 475 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZNF845Q96IR2 970 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 ENY2Q9NPA8 101 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 WASH6PQ9NQA3 447 aa9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 MCTS1Q9ULC4 181 aaKnown RBP9.92□□□□□ -0.82
PCDHGA1-202ENST00000517417 OLFM2O95897 454 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 CD14P08571 375 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 PPP3CBP16298 524 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 SERPINA2P20848 420 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 FOXK1P85037 733 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 MEP1BQ16820 701 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC2A12Q8TD20 617 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 PHB2Q99623 299 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 EIF5A2Q9GZV4 153 aaKnown RBP9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 DNTTIP1Q9H147 329 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 ACKR4Q9NPB9 350 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 EXOGQ9Y2C4 368 aaKnown RBP9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 ARPC4-TTLL3A0A0A6YYG9 625 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 BPNT1O95861 308 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 CAV2P51636 162 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 BIDP55957 195 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 CLDN17P56750 224 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 FAAP20Q6NZ36 180 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 HAVCR2Q8TDQ0 301 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 ARHGDIGQ99819 225 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 CMC2Q9NRP2 79 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 DUSP22Q9NRW4 184 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 EMC3Q9P0I2 261 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 SH3BGRL2Q9UJC5 107 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC6A5Q9Y345 797 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 DOCK4Q8N1I0 1966 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 TBX19O60806 448 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 S100A11P31949 105 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 IL13RA1P78552 427 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 SORDQ00796 357 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 FGL1Q08830 312 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 C17orf67Q0P5P2 114 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 PPA1Q15181 289 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 C14orf28Q4W4Y0 310 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 HEPHL1Q6MZM0 1159 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 LINC00696Q6ZRV3 163 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 LSMEM1Q8N8F7 131 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZNF454Q8N9F8 522 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 PIGCQ92535 297 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLX1AQ9BQ83 275 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 SYT3Q9BQG1 590 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 ENKD1Q9H0I2 346 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 LIN7BQ9HAP6 207 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 HRASLSQ9HDD0 168 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 C19orf53Q9UNZ5 99 aaPredicted RBP9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 LSM5Q9Y4Y9 91 aaKnown RBP9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 A0A0A6YYD5 115 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 CER1O95813 267 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 WNT1P04628 370 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 CSF1P09603 554 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 DPP4P27487 766 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 POLR2HP52434 150 aaKnown RBP9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 CMTM4Q8IZR5 234 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZSCAN1Q8NBB4 408 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 OR10A2Q9H208 303 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 DLL4Q9NR61 685 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 WSB2Q9NYS7 404 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms