RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 ISL1P61371 349 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 SIRPAP78324 504 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 TMED1Q13445 227 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC35D3Q5M8T2 416 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 PHYHD1Q5SRE7 291 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 AADACL4Q5VUY2 407 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 MEDAGQ5VYS4 303 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 NXNL2Q5VZ03 156 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 DNM1P34Q6PK57 102 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 ENTHD1Q8IYW4 607 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 TCEANCQ8N8B7 351 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 RELL2Q8NC24 303 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 SDR9C7Q8NEX9 313 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 OR6N1Q8NGY5 312 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 OR2T4Q8NH00 348 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 LILRB4Q8NHJ6 448 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 FAM81AQ8TBF8 368 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 MCHR2Q969V1 340 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 SYT4Q9H2B2 425 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 C12orf49Q9H741 205 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 GPR35Q9HC97 309 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 HINT3Q9NQE9 182 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 IMPAD1Q9NX62 359 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 ELOVL5Q9NYP7 299 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF226Q9NYT6 803 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 MOKQ9UQ07 419 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 HCFC1P51610 2035 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 DOPEY1Q5JWR5 2465 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 WIPF3A6NGB9 483 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF587BE7ETH6 402 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 DHHO43323 396 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 DENRO43583 198 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 KHDRBS3O75525 346 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 HRGP04196 525 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 QDPRP09417 244 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 CTLA4P16410 223 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 MYF6P23409 242 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 MPGP29372 298 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 CD47Q08722 323 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 KCNMB1Q16558 191 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 XKRXQ6PP77 449 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 NCCRP1Q6ZVX7 275 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 LINGO2Q7L985 606 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 CXXC5Q7LFL8 322 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 LIX1LQ8IVB5 337 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 CPOQ8IVL8 374 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 GID4Q8IVV7 300 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 C8orf59Q8N0T1 100 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 OR6V1Q8N148 313 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF808Q8N4W9 903 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF610Q8N9Z0 462 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 SYT14Q8NB59 555 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 C1orf162Q8NEQ5 155 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 MUS81Q96NY9 551 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 USB1Q9BQ65 265 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 WACQ9BTA9 647 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 ULBP2Q9BZM5 246 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 NUAK2Q9H093 628 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 OR10A4Q9H209 315 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 CRLF2Q9HC73 371 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 UPB1Q9UBR1 384 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 PRSS50Q9UI38 385 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 B9D1Q9UPM9 204 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 UGT2A1Q9Y4X1 527 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 LRRC42Q9Y546 428 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 CACNA1CQ13936 2221 aa10.55□□□□□ -0.72
PDLIM5-220ENST00000514830 SH3D21A4FU49 640 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 CLEC18AA5D8T8 446 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF99A8MXY4 864 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 H7C1C5 153 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 DCTN6O00399 190 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 TLX2O43763 284 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 AGFG2O95081 481 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 GNAO1P09471 354 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 SPI1P17947 270 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 NPR2P20594 1047 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 PSMB1P20618 241 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 BMP5P22003 454 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 ASCL1P50553 236 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF84P51523 738 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 LCN6P62502 163 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 MRPS34P82930 218 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 ROR2Q01974 943 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 TGFBR3Q03167 851 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 FMODQ06828 376 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 LGALS3BPQ08380 585 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 MAD2L1BPQ15013 274 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 C6orf52Q5T4I8 152 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 LINC01590Q5TEZ4 76 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 CARD17Q5XLA6 110 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 PLBD1Q6P4A8 553 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF474Q6S9Z5 364 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 CLEC18BQ6UXF7 455 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 THAP5Q7Z6K1 395 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 CYB561A3Q8NBI2 242 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 CLEC18CQ8NCF0 446 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 RFKQ969G6 155 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 Q96MT0 163 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 PSMG3-AS1Q96PY0 264 aa10.54□□□□□ -0.72
PDLIM5-220ENST00000514830 ALKBH3Q96Q83 286 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms