RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 DAZ2Q13117 558 aaKnown RBP5.14□□□□□ -1.59
NUP54-215ENST00000514313 KCTD19Q17RG1 926 aaPredicted RBP5.14□□□□□ -1.59
NUP54-215ENST00000514313 KRTAP27-1Q3LI81 207 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 FHL5Q5TD97 284 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 RSBN1Q5VWQ0 802 aaPredicted RBP5.14□□□□□ -1.59
NUP54-215ENST00000514313 PLCXD3Q63HM9 321 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 MICU2Q8IYU8 434 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 PRELID2Q8N945 189 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 SUMF2Q8NBJ7 301 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 LYPD6BQ8NI32 183 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 GPX8Q8TED1 209 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 IMMP1LQ96LU5 166 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 DAZ3Q9NR90 486 aaKnown RBP5.14□□□□□ -1.59
NUP54-215ENST00000514313 GJE1A6NN92 205 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 SLC31A2O15432 143 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 AIREO43918 545 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 HPGDP15428 266 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 ZNF250P15622 560 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 MGMTP16455 207 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 CTRLP40313 264 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 SLC11A1P49279 550 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 SH3BGRP55822 239 aaPredicted RBP5.13□□□□□ -1.59
NUP54-215ENST00000514313 SLC25A11Q02978 314 aaKnown RBP5.13□□□□□ -1.59
NUP54-215ENST00000514313 SF3A2Q15428 464 aaKnown RBP5.13□□□□□ -1.59
NUP54-215ENST00000514313 SGCAQ16586 387 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 XKR4Q5GH76 650 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 OR52W1Q6IF63 320 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 ZNF584Q8IVC4 421 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 OR9G4Q8NGQ1 327 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 OR2G3Q8NGZ4 309 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 ZNF707Q96C28 371 aaPredicted RBP5.13□□□□□ -1.59
NUP54-215ENST00000514313 LRRC58Q96CX6 371 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 PIK3IP1Q96FE7 263 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 OSBPL10Q9BXB5 764 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 CLMPQ9H6B4 373 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 RPF2Q9H7B2 306 aaKnown RBP5.13□□□□□ -1.59
NUP54-215ENST00000514313 CYP3A43Q9HB55 503 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 MTCH1Q9NZJ7 389 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 PLEKHG2Q9H7P9 1386 aa5.13□□□□□ -1.59
NUP54-215ENST00000514313 KCNE1BA0A087WTH5 132 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 A0A0B4J2A0 478 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 AIFM1O95831 613 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 ACTL6AO96019 429 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 KLHL40Q2TBA0 621 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 TTC29Q8NA56 475 aaPredicted RBP5.12□□□□□ -1.59
NUP54-215ENST00000514313 OR10G9Q8NGN4 311 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 OR52E5Q8NH55 327 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 ECHDC3Q96DC8 303 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 GABARAPL3Q9BY60 117 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 UCK2Q9BZX2 261 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 ACTR3CQ9C0K3 210 aaPredicted RBP5.12□□□□□ -1.59
NUP54-215ENST00000514313 SLC7A5P2Q9GIP4 190 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 MMP26Q9NRE1 261 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 PRR34Q9NV39 138 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 SHPKQ9UHJ6 478 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 LGALS13Q9UHV8 139 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 AGRNO00468 2067 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 AKNAQ7Z591 1439 aa5.12□□□□□ -1.59
NUP54-215ENST00000514313 ARPC4-TTLL3A0A0A6YYG9 625 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 DPM1O60762 260 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 UTS2O95399 124 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 IGHV3-43DP0DP04 118 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 TDGF1P13385 188 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 ZNF19P17023 458 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 SLC1A2P43004 574 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 TDGF1P3P51864 188 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 NUTF2P61970 127 aaKnown RBP5.11□□□□□ -1.59
NUP54-215ENST00000514313 RPS21P63220 83 aaKnown RBP5.11□□□□□ -1.59
NUP54-215ENST00000514313 ZNF79Q15937 498 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 ZBED5Q49AG3 693 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 TTC23LQ6PF05 361 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 LINC00173Q6ZV60 143 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 CMC1Q7Z7K0 106 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 DCAF4L2Q8NA75 395 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 NPBQ8NG41 125 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 GEMIN6Q8WXD5 167 aaKnown RBP5.11□□□□□ -1.59
NUP54-215ENST00000514313 RDH5Q92781 318 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 P2RX4Q99571 388 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 SH3GL3Q99963 347 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 BLZF1Q9H2G9 400 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 NXF3Q9H4D5 531 aaKnown RBP5.11□□□□□ -1.59
NUP54-215ENST00000514313 C8orf33Q9H7E9 229 aaPredicted RBP5.11□□□□□ -1.59
NUP54-215ENST00000514313 FANCEQ9HB96 536 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 BEX1Q9HBH7 125 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 SLCO1B3Q9NPD5 702 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 KCNJ16Q9NPI9 418 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 CCDC59Q9P031 241 aaKnown RBP5.11□□□□□ -1.59
NUP54-215ENST00000514313 PEF1Q9UBV8 284 aaKnown RBP5.11□□□□□ -1.59
NUP54-215ENST00000514313 TP53TG3Q9ULZ0 132 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 TRAPPC4Q9Y296 219 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 RHBDD3Q9Y3P4 386 aa5.11□□□□□ -1.59
NUP54-215ENST00000514313 HIDE1A8MVS5 230 aa5.1□□□□□ -1.59
NUP54-215ENST00000514313 CCNB2O95067 398 aa5.1□□□□□ -1.59
NUP54-215ENST00000514313 C6orf47O95873 294 aa5.1□□□□□ -1.59
NUP54-215ENST00000514313 INSP01308 110 aa5.1□□□□□ -1.59
NUP54-215ENST00000514313 UBCP0CG48 685 aaKnown RBP5.1□□□□□ -1.59
NUP54-215ENST00000514313 CNR1P21554 472 aa5.1□□□□□ -1.59
NUP54-215ENST00000514313 LYZP61626 148 aa5.1□□□□□ -1.59
NUP54-215ENST00000514313 RAB11AP62491 216 aa5.1□□□□□ -1.59
NUP54-215ENST00000514313 UNC119Q13432 240 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms