RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 ZNF226Q9NYT6 803 aa18.42■□□□□ 0.54
NEIL3-202ENST00000513321 VSX1Q9NZR4 365 aaPredicted RBP18.42■□□□□ 0.54
NEIL3-202ENST00000513321 TMEFF2Q9UIK5 374 aaPredicted RBP18.42■□□□□ 0.54
NEIL3-202ENST00000513321 ANKHD1Q8IWZ3 2542 aaKnown RBP18.42■□□□□ 0.54
NEIL3-202ENST00000513321 ANPEPP15144 967 aa18.41■□□□□ 0.54
NEIL3-202ENST00000513321 CRISP1P54107 249 aa18.41■□□□□ 0.54
NEIL3-202ENST00000513321 PPP2R2BQ00005 443 aa18.41■□□□□ 0.54
NEIL3-202ENST00000513321 PPA1Q15181 289 aa18.41■□□□□ 0.54
NEIL3-202ENST00000513321 ZNF787Q6DD87 383 aa18.41■□□□□ 0.54
NEIL3-202ENST00000513321 SLC27A4Q6P1M0 643 aa18.41■□□□□ 0.54
NEIL3-202ENST00000513321 LEG1Q6P5S2 330 aa18.41■□□□□ 0.54
NEIL3-202ENST00000513321 ZNF627Q7L945 461 aa18.41■□□□□ 0.54
NEIL3-202ENST00000513321 RBM4BQ9BQ04 359 aaKnown RBP18.41■□□□□ 0.54
NEIL3-202ENST00000513321 RBM4Q9BWF3 364 aaKnown RBP18.41■□□□□ 0.54
NEIL3-202ENST00000513321 SLC25A15Q9Y619 301 aa18.41■□□□□ 0.54
NEIL3-202ENST00000513321 B4GALT1P15291 398 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 IGFBP5P24593 272 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 HOXC12P31275 282 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.4■□□□□ 0.54
NEIL3-202ENST00000513321 PGGHGQ32M88 737 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 ZNF362Q5T0B9 420 aaPredicted RBP18.4■□□□□ 0.54
NEIL3-202ENST00000513321 ACSM5Q6NUN0 579 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 SDR9C7Q8NEX9 313 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 RERGLQ9H628 205 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 TMEM38BQ9NVV0 291 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 UGT2A1Q9Y4X1 527 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 PKDREJQ9NTG1 2253 aa18.4■□□□□ 0.54
NEIL3-202ENST00000513321 SLC16A7O60669 478 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 RENP00797 406 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 HOXB1P14653 301 aaPredicted RBP18.39■□□□□ 0.54
NEIL3-202ENST00000513321 UBE2NP61088 152 aaKnown RBP18.39■□□□□ 0.54
NEIL3-202ENST00000513321 ESRRGP62508 458 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 CDK5Q00535 292 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 DAZAP2Q15038 168 aaPredicted RBP18.39■□□□□ 0.54
NEIL3-202ENST00000513321 ETFDHQ16134 617 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 TMEM236Q5W0B7 351 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 KLHL24Q6TFL4 600 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 CBR4Q8N4T8 237 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 NPEPL1Q8NDH3 523 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 HTRA1Q92743 480 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 MARVELD3Q96A59 401 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 SNX18Q96RF0 628 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 C9orf16Q9BUW7 83 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 NUAK2Q9H093 628 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 AMDHD2Q9Y303 409 aa18.39■□□□□ 0.54
NEIL3-202ENST00000513321 OR6C68A6NDL8 312 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 EI24O14681 340 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 CTLA4P16410 223 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 CRYGSP22914 178 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 CDAP32320 146 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 GRK5P34947 590 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 DAG1Q14118 895 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 SSX8Q7RTT4 187 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 ZNF295-AS1Q8N0V1 137 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 SLC22A24Q8N4F4 322 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 TSSK2Q96PF2 358 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 DDOQ99489 341 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 C1QTNF6Q9BXI9 259 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 SRA1Q9HD15 236 aaKnown RBP18.39■□□□□ 0.53
NEIL3-202ENST00000513321 OBP2BQ9NPH6 170 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 KLHL21Q9UJP4 597 aa18.39■□□□□ 0.53
NEIL3-202ENST00000513321 ALPLP05186 524 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 OR8G3PP0DMU2 310 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 TUBA1BP68363 451 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 TUBA4AP68366 448 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 PTGES3Q15185 160 aaKnown RBP18.38■□□□□ 0.53
NEIL3-202ENST00000513321 SGCAQ16586 387 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 C1QTNF12Q5T7M4 302 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 SEZ6L2Q6UXD5 910 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 ZBTB49Q6ZSB9 765 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 TUBA1AQ71U36 451 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 SKA3Q8IX90 412 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 CCDC36Q8IYA8 594 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 CYB561A3Q8NBI2 242 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 EME1Q96AY2 570 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 SLC29A1Q99808 456 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 DCLRE1BQ9H816 532 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 SEC61A2Q9H9S3 476 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 NGBQ9NPG2 151 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 RPRD1BQ9NQG5 326 aaKnown RBP18.38■□□□□ 0.53
NEIL3-202ENST00000513321 CMC2Q9NRP2 79 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 USE1Q9NZ43 259 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 ENOPH1Q9UHY7 261 aa18.38■□□□□ 0.53
NEIL3-202ENST00000513321 ARPC4-TTLL3A0A0A6YYG9 625 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 A0A1W2PPL8 197 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 RIIAD1A6NNX1 92 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 DCTN6O00399 190 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 KHDRBS3O75525 346 aaKnown RBP18.37■□□□□ 0.53
NEIL3-202ENST00000513321 WNT11O96014 354 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 IFNGP01579 166 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 HMGN1P05114 100 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 EPHA2P29317 976 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 CRABP1P29762 137 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 GUCA1AP43080 201 aaPredicted RBP18.37■□□□□ 0.53
NEIL3-202ENST00000513321 CAPZA2P47755 286 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 ALDH3A2P51648 485 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 MRPS34P82930 218 aaKnown RBP18.37■□□□□ 0.53
NEIL3-202ENST00000513321 DBPQ10586 325 aaPredicted RBP18.37■□□□□ 0.53
NEIL3-202ENST00000513321 OR6V1Q8N148 313 aa18.37■□□□□ 0.53
NEIL3-202ENST00000513321 SLC37A3Q8NCC5 494 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms