RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 NPRL3Q12980 569 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 GINS1Q14691 196 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 PTGES3Q15185 160 aaKnown RBP6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 LRRC36Q1X8D7 754 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 CEACAM16Q2WEN9 425 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 THEM4Q5T1C6 240 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 OGFRL1Q5TC84 451 aaPredicted RBP6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 LEG1Q6P5S2 330 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 DNM1P34Q6PK57 102 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 PTCHD4Q6ZW05 846 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 WDFY1Q8IWB7 410 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 PACRGLQ8N7B6 248 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 C1orf162Q8NEQ5 155 aaPredicted RBP6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 OR4Q3Q8NH05 313 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 TMEM54Q969K7 222 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 RBP7Q96R05 134 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 OR10A4Q9H209 315 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 CMC2Q9NRP2 79 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 SMPD3Q9NY59 655 aaPredicted RBP6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 VSX1Q9NZR4 365 aaPredicted RBP6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 NKX1-2Q9UD57 310 aaPredicted RBP6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 KLHL21Q9UJP4 597 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 PLCE1Q9P212 2302 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 ADGRG4Q8IZF6 3080 aa6.68□□□□□ -1.34
HMGXB3-204ENST00000513318 CIB4A0PJX0 185 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC22A23A1A5C7 686 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 RIIAD1A6NNX1 92 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 ZAR1LA6NP61 321 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF99A8MXY4 864 aaPredicted RBP6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 C16orf97H3BN30 126 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 H7C1C5 153 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 DHHO43323 396 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 LYZL6O75951 148 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 RENP00797 406 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 HMGN1P05114 100 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 ITGA5P08648 1049 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 QDPRP09417 244 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF3P17036 446 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 IGHV1-2P23083 117 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 IL32P24001 234 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 GRNP28799 593 aaKnown RBP6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 CRABP1P29762 137 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 CCKARP32238 428 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF84P51523 738 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 LCN6P62502 163 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 FMODQ06828 376 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 PHYHD1Q5SRE7 291 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC35F1Q5T1Q4 408 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 C10orf128Q5T292 105 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 SFRP5Q5T4F7 317 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 SLX4IPQ5VYV7 408 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 LPCAT4Q643R3 524 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 OR7E24Q6IFN5 339 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 ACSM5Q6NUN0 579 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 STAC2Q6ZMT1 411 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 LINGO2Q7L985 606 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 CXorf67Q86X51 503 aaPredicted RBP6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 C17orf78Q8N4C9 275 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 IQCF1Q8N6M8 205 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF433Q8N7K0 673 aaPredicted RBP6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 SYT14Q8NB59 555 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 SDR9C7Q8NEX9 313 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 STEAP2Q8NFT2 490 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 OR52E2Q8NGJ4 325 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 OR4K13Q8NH42 304 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 KISS1RQ969F8 398 aaPredicted RBP6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 MCHR2Q969V1 340 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 NMD3Q96D46 503 aaKnown RBP6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 BOD1Q96IK1 185 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 PLEKHA8Q96JA3 519 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC38A2Q96QD8 506 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 NMNAT3Q96T66 252 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC29A1Q99808 456 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 FOXB1Q99853 325 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 HDHD5Q9BXW7 423 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 RACGAP1Q9H0H5 632 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 SYT4Q9H2B2 425 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 VCX3BQ9H321 246 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 FN3KQ9H479 309 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 RIBC2Q9H4K1 309 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 CRLF2Q9HC73 371 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 GPR35Q9HC97 309 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 BRD7Q9NPI1 651 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 GPR52Q9Y2T5 361 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 FKBP7Q9Y680 259 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 CHD3Q12873 2000 aaKnown RBP6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 PTPN13Q12923 2485 aa6.67□□□□□ -1.34
HMGXB3-204ENST00000513318 GCN1Q92616 2671 aaKnown RBP6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 TENM4Q6N022 2769 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 DSCAMO60469 2012 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 PRSS44E7EML9 344 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 SURF4O15260 269 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 RAD51DO75771 328 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC2A10O95528 541 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 SNAP29O95721 258 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 BMP4P12644 408 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 PPP3CBP16298 524 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 CTLA4P16410 223 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 PAICSP22234 425 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms