RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 SFXN3Q9BWM7 321 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 LINC00470Q9BZP3 86 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 NMNAT2Q9BZQ4 307 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 NUAK2Q9H093 628 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 RACGAP1Q9H0H5 632 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 C12orf49Q9H741 205 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 MED20Q9H944 212 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 SRA1Q9HD15 236 aaKnown RBP9.62□□□□□ -0.87
PFDN1-204ENST00000512707 SH3BGRL2Q9UJC5 107 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 TINAGQ9UJW2 476 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 ING1Q9UK53 422 aaPredicted RBP9.62□□□□□ -0.87
PFDN1-204ENST00000512707 PCDHGB1Q9Y5G3 927 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 FAM215AQ9Y5M1 114 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 MED12Q93074 2177 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 KIAA1549Q9HCM3 1950 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 DNAJC13O75165 2243 aa9.62□□□□□ -0.87
PFDN1-204ENST00000512707 A0A1W2PPL8 197 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 WBP4O75554 376 aaKnown RBP9.61□□□□□ -0.87
PFDN1-204ENST00000512707 CNOT4O95628 575 aaKnown RBP9.61□□□□□ -0.87
PFDN1-204ENST00000512707 FADS2O95864 444 aaKnown RBP9.61□□□□□ -0.87
PFDN1-204ENST00000512707 GYPBP06028 91 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 GLI4P10075 376 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 CTSSP25774 331 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 OPRM1P35372 400 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 CA7P43166 264 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 OR3A2P47893 321 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 NUDT6P53370 316 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 ZNF91Q05481 1191 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 RUNX1T1Q06455 604 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 RAB40BQ12829 278 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 STK11Q15831 433 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 HIST3H3Q16695 136 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 RTL6Q6ICC9 239 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 MTFR2Q6P444 385 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 C3P1Q6ZMU1 363 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 ZBTB46Q86UZ6 589 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 GALNT11Q8NCW6 608 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 ZNF540Q8NDQ6 660 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 BBS1Q8NFJ9 593 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 OR10H5Q8NGA6 315 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 APH1BQ8WW43 257 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 PTP4A1Q93096 173 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 MCHR2Q969V1 340 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 MRPL48Q96GC5 212 aaKnown RBP9.61□□□□□ -0.87
PFDN1-204ENST00000512707 CNN2Q99439 309 aaKnown RBP9.61□□□□□ -0.87
PFDN1-204ENST00000512707 TEAD3Q99594 435 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 USB1Q9BQ65 265 aaKnown RBP9.61□□□□□ -0.87
PFDN1-204ENST00000512707 PLCXD1Q9NUJ7 323 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 UBAP1Q9NZ09 502 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 CNOT2Q9NZN8 540 aaKnown RBP9.61□□□□□ -0.87
PFDN1-204ENST00000512707 FOXD3Q9UJU5 478 aaPredicted RBP9.61□□□□□ -0.87
PFDN1-204ENST00000512707 PROCRQ9UNN8 238 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 B9D1Q9UPM9 204 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 OSGIN2Q9Y236 505 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 DOPEY2Q9Y3R5 2298 aa9.61□□□□□ -0.87
PFDN1-204ENST00000512707 DVL2O14641 736 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 DHHO43323 396 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 TMCC2O75069 709 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 SMNDC1O75940 238 aaKnown RBP eCLIP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 DBTP11182 482 aaKnown RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 PIPP12273 146 aaPredicted RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 CTLA4P16410 223 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 ZNF823P16415 610 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 SLC2A5P22732 501 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 LAP3P28838 519 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 GSTT1P30711 240 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 CEACAM8P31997 349 aaPredicted RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 PYCR1P32322 319 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 SH3BGRP55822 239 aaPredicted RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 GABARAPL2P60520 117 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 ACTC1P68032 377 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 ACTA1P68133 377 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 ROR2Q01974 943 aaKnown RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 TGFBR3Q03167 851 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 FMODQ06828 376 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 PMPCAQ10713 525 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 GUSBP1Q15486 140 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 SMN1Q16637 294 aaKnown RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 KCTD21Q4G0X4 260 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 C10orf128Q5T292 105 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 FBXW9Q5XUX1 488 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 UGT2A3Q6UWM9 527 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 NUFIP2Q7Z417 695 aaKnown RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 BCDIN3DQ7Z5W3 292 aaKnown RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 OR6V1Q8N148 313 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 STX19Q8N4C7 294 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 NSMAFQ92636 917 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 RND1Q92730 232 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 RNFT2Q96EX2 444 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 TSSK2Q96PF2 358 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 ALKBH3Q96Q83 286 aaPredicted RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 INTS14Q96SY0 518 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 DDOQ99489 341 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 COPS4Q9BT78 406 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 RBM24Q9BX46 236 aaKnown RBP9.6□□□□□ -0.87
PFDN1-204ENST00000512707 HCAR1Q9BXC0 346 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 PIGMQ9H3S5 423 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 SEC61A2Q9H9S3 476 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 CRLF2Q9HC73 371 aa9.6□□□□□ -0.87
PFDN1-204ENST00000512707 CHCHD3Q9NX63 227 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms