RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 VBP1P61758 197 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 SPCS2Q15005 226 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF684Q5T5D7 378 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 SLC18B1Q6NT16 456 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 RPL22L1Q6P5R6 122 aaKnown RBP13.55□□□□□ -0.24
SCLT1-209ENST00000511426 KCTD18Q6PI47 426 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-209ENST00000511426 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-209ENST00000511426 MS4A15Q8N5U1 240 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 ABTB1Q969K4 478 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-209ENST00000511426 DACH2Q96NX9 599 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 CHCHD6Q9BRQ6 235 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 TTYH2Q9BSA4 534 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 DCUN1D5Q9BTE7 237 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 SRXN1Q9BYN0 137 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 OR51E2Q9H255 320 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 ISG20L2Q9H9L3 353 aaKnown RBP13.55□□□□□ -0.24
SCLT1-209ENST00000511426 RNF122Q9H9V4 155 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 ZMIZ1Q9ULJ6 1067 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 CUL9Q8IWT3 2517 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 CNOT1A5YKK6 2376 aaKnown RBP13.54□□□□□ -0.24
SCLT1-209ENST00000511426 FAM166BA8MTA8 275 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 J3QLW9 94 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 GPR171O14626 319 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 OGG1O15527 345 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 KRT8P05787 483 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF823P16415 610 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF19P17023 458 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF182P17025 639 aaPredicted RBP13.54□□□□□ -0.24
SCLT1-209ENST00000511426 EIF1AXP47813 144 aaKnown RBP13.54□□□□□ -0.24
SCLT1-209ENST00000511426 CLDN18P56856 261 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 NCS1P62166 190 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 DOC2BQ14184 412 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 VASNQ6EMK4 673 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 DEGS2Q6QHC5 323 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 RHOUQ7L0Q8 258 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 SYT14Q8NB59 555 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 DYNC2LI1Q8TCX1 351 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 RPS4Y2Q8TD47 263 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 RPL3LQ92901 407 aaKnown RBP13.54□□□□□ -0.24
SCLT1-209ENST00000511426 DCSTAMPQ9H295 470 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 CCDC59Q9P031 241 aaKnown RBP13.54□□□□□ -0.24
SCLT1-209ENST00000511426 COPS3Q9UNS2 423 aa13.54□□□□□ -0.24
SCLT1-209ENST00000511426 COA3Q9Y2R0 106 aaPredicted RBP13.54□□□□□ -0.24
SCLT1-209ENST00000511426 IGKV3D-15A0A087WSY6 115 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 METTL15A6NJ78 407 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 FAM171A2A8MVW0 826 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 CXCL13O43927 109 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 GPRIN2O60269 458 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 SLC34A2O95436 690 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 LALBAP00709 142 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 SERPINA3P01011 423 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 IGHG3P01860 377 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 CPN1P15169 458 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 CD79BP40259 229 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 EIF2S3P41091 472 aaKnown RBP13.53□□□□□ -0.24
SCLT1-209ENST00000511426 CLDN17P56750 224 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 OR12D2P58182 307 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 SIRPAP78324 504 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 ADAM8P78325 824 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 ROM1Q03395 351 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 INAQ16352 499 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 C10orf128Q5T292 105 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 DMKNQ6E0U4 476 aaPredicted RBP13.53□□□□□ -0.24
SCLT1-209ENST00000511426 SLC25A47Q6Q0C1 308 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 SSX6Q7RTT6 188 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 DPY19L4Q7Z388 723 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 TMEM54Q969K7 222 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 RELTQ969Z4 430 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 TMEM45BQ96B21 275 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 SMIM19Q96E16 107 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 PELI1Q96FA3 418 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 EMC6Q9BV81 110 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 RERGLQ9H628 205 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 GLTPQ9NZD2 209 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 MCTS1Q9ULC4 181 aaKnown RBP13.53□□□□□ -0.24
SCLT1-209ENST00000511426 TRGV5A0A0B4J1U4 118 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 LOC100506127A0A0U1RQW1 187 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF716A6NP11 495 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF593O00488 134 aaPredicted RBP13.53□□□□□ -0.24
SCLT1-209ENST00000511426 RRP8O43159 456 aaKnown RBP13.53□□□□□ -0.24
SCLT1-209ENST00000511426 RAMP1O60894 148 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF254O75437 659 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 GPX5O75715 221 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF432O94892 652 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 SYNGR4O95473 234 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF24P17028 368 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 NR4A1P22736 598 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 LAP3P28838 519 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 CSNK1A1P48729 337 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 UCNP55089 124 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 CLDN15P56746 228 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 CDK5R1Q15078 307 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 KCNMB1Q16558 191 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF544Q6NX49 715 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 PAMR1Q6UXH9 720 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 TRILQ7L0X0 811 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 FCRLAQ7L513 359 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 UBQLNLQ8IYU4 475 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 TMEM123Q8N131 208 aa13.53□□□□□ -0.24
SCLT1-209ENST00000511426 PHYHIPQ92561 330 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms