RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 TRABD2BA6NFA1 517 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 SNPHO15079 494 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 ABHD16AO95870 558 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 PTTG1O95997 202 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 MAS1P04201 325 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 RFX2P48378 723 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 ALKBH1Q13686 389 aaKnown RBP13.34□□□□□ -0.27
PHF3-209ENST00000509330 EXT1Q16394 746 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 TRIQKQ629K1 86 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 C3orf33Q6P1S2 294 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 NDUFAF7Q7L592 441 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 MRPL48Q96GC5 212 aaKnown RBP13.34□□□□□ -0.27
PHF3-209ENST00000509330 STRADBQ9C0K7 418 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 FKBP7Q9Y680 259 aa13.34□□□□□ -0.27
PHF3-209ENST00000509330 SERPINA3P01011 423 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 TACSTD2P09758 323 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 DPP4P27487 766 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 SUMO3P55854 103 aaPredicted RBP13.33□□□□□ -0.28
PHF3-209ENST00000509330 TRAM1Q15629 374 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 TMEM225Q6GV28 225 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 KRT77Q7Z794 578 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 SERPINA12Q8IW75 414 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 PRSS35Q8N3Z0 413 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 ASB10Q8WXI3 467 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 GCDHQ92947 438 aaPredicted RBP13.33□□□□□ -0.28
PHF3-209ENST00000509330 MAP6Q96JE9 813 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 MRGPRX4Q96LA9 322 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 SP140LQ9H930 580 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 CENPMQ9NSP4 180 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 TRAPPC4Q9Y296 219 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 ZNF879B4DU55 563 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 FAM47E-STBD1D6RA91 191 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 PNPP00491 289 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 SRMP19623 302 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 OC90Q02509 493 aaPredicted RBP13.33□□□□□ -0.28
PHF3-209ENST00000509330 SCN1BQ07699 218 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 OPN5Q6U736 354 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 PLCZ1Q86YW0 608 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 OR2G2Q8NGZ5 317 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 WACQ9BTA9 647 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 HDHD2Q9H0R4 259 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 SEC61A2Q9H9S3 476 aa13.33□□□□□ -0.28
PHF3-209ENST00000509330 ARL6IP5O75915 188 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 CDAP32320 146 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 RFC3P40938 356 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 HSF2Q03933 536 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 GLO1Q04760 184 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 MFGE8Q08431 387 aaPredicted RBP13.32□□□□□ -0.28
PHF3-209ENST00000509330 CLPPQ16740 277 aaPredicted RBP13.32□□□□□ -0.28
PHF3-209ENST00000509330 WDR38Q5JTN6 314 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 ZNF57Q68EA5 555 aaPredicted RBP13.32□□□□□ -0.28
PHF3-209ENST00000509330 ESX1Q8N693 406 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 MINDY2Q8NBR6 621 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 ZFP3Q96NJ6 502 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 ABHD6Q9BV23 337 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 B3GAT1Q9P2W7 334 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 RIF1Q5UIP0 2472 aaKnown RBP13.32□□□□□ -0.28
PHF3-209ENST00000509330 A0A1W2PPL8 197 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 B4E171 279 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 ADRB1P08588 477 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 UCHL1P09936 223 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 GALP22466 123 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 TSPAN7P41732 249 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 INPP1P49441 399 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 PLA2G2CQ5R387 149 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 AGAP7PQ5VUJ5 663 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 DBX2Q6ZNG2 339 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 DCXRQ7Z4W1 244 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 UBQLNLQ8IYU4 475 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 C19orf18Q8NEA5 215 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 GFI1Q99684 422 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 PPP1R3EQ9H7J1 279 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 ALKBH4Q9NXW9 302 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 VSX1Q9NZR4 365 aaPredicted RBP13.32□□□□□ -0.28
PHF3-209ENST00000509330 DKKL1Q9UK85 242 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 PHF3Q92576 2039 aaKnown RBP13.32□□□□□ -0.28
PHF3-209ENST00000509330 PCNX2A6NKB5 2137 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 SULT2B1O00204 365 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 LANCL1O43813 399 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 EPXP11678 715 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 TPTEP56180 551 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 MFAP5Q13361 173 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 CCDC58Q4VC31 144 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 STPG1Q5TH74 334 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 SLC22A10Q63ZE4 541 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 YRDCQ86U90 279 aaKnown RBP13.32□□□□□ -0.28
PHF3-209ENST00000509330 LGALS14Q8TCE9 139 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 RNF138Q8WVD3 245 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 TSEN15Q8WW01 171 aaKnown RBP13.32□□□□□ -0.28
PHF3-209ENST00000509330 PROK2Q9HC23 129 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 P4HTMQ9NXG6 502 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 TEKT2Q9UIF3 430 aa13.32□□□□□ -0.28
PHF3-209ENST00000509330 FARSAQ9Y285 508 aaKnown RBP13.32□□□□□ -0.28
PHF3-209ENST00000509330 ZNF208O43345 1280 aa13.31□□□□□ -0.28
PHF3-209ENST00000509330 CD53P19397 219 aa13.31□□□□□ -0.28
PHF3-209ENST00000509330 MSX1P28360 303 aa13.31□□□□□ -0.28
PHF3-209ENST00000509330 TALDO1P37837 337 aa13.31□□□□□ -0.28
PHF3-209ENST00000509330 KIR3DL2P43630 455 aa13.31□□□□□ -0.28
PHF3-209ENST00000509330 RAB15P59190 212 aa13.31□□□□□ -0.28
PHF3-209ENST00000509330 SLC18B1Q6NT16 456 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms