RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 FAIMQ9NVQ4 179 aa9.24□□□□□ -0.93
POLR2J3-213ENST00000508848 USF3Q68DE3 2245 aa9.24□□□□□ -0.93
POLR2J3-213ENST00000508848 TRAV27A0A087WT01 109 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 PRSS37A4D1T9 235 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 OR10H3O60404 316 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 CRYAAP02489 173 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 SERPINA5P05154 406 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 DANCRP0C864 163 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 PTNP21246 168 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 SLC6A6P31641 620 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 RPL4P36578 427 aaKnown RBP9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 GUCA1AP43080 201 aaPredicted RBP9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 GPR4P46093 362 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 PTDSS1P48651 473 aaKnown RBP9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 RPS6KA3P51812 740 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 FXYD6P3P58550 94 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 RUNX1T1Q06455 604 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 KEAP1Q14145 624 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 GSG1Q2KHT4 349 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 DEFB113Q30KQ7 82 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 PGBD2Q6P3X8 592 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 RASSF6Q6ZTQ3 369 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 OR13C2Q8NGS9 318 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 OR52J3Q8NH60 311 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 HDAC2Q92769 488 aaKnown RBP9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 CCDC124Q96CT7 223 aaKnown RBP9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 FAM46AQ96IP4 442 aaKnown RBP9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 RSRC1Q96IZ7 334 aaKnown RBP9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 GPA33Q99795 319 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 DHRS9Q9BPW9 319 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 REEP1Q9H902 201 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 ARMC1Q9NVT9 282 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 CISD1Q9NZ45 108 aaKnown RBP9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 ZNF224Q9NZL3 707 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 VSX1Q9NZR4 365 aaPredicted RBP9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 DNAJB9Q9UBS3 223 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 MED13LQ71F56 2210 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 AKAP9Q99996 3911 aa9.23□□□□□ -0.93
POLR2J3-213ENST00000508848 IGHV1-18A0A0C4DH31 117 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 SLC22A23A1A5C7 686 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 VSTM5A8MXK1 200 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 EBAG9O00559 213 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 XKRYO14609 159 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 ABCD4O14678 606 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 CCNB2O95067 398 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 PLAUP00749 431 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 CST1P01037 141 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 ZNF14P17017 642 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 CDH2P19022 906 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 APOBEC3AP31941 199 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 ACVR1BP36896 505 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 ZNF83P51522 516 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 RAB1AP62820 205 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 NAAAQ02083 359 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 KCNMB1Q16558 191 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 SLC36A2Q495M3 483 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 C9orf135Q5VTT2 229 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 CARD17Q5XLA6 110 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 YTHDF3Q7Z739 585 aaKnown RBP9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 SKA3Q8IX90 412 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 NUP37Q8NFH4 326 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 SMAP2Q8WU79 429 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 DNAJC9Q8WXX5 260 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 AKAP1Q92667 903 aaKnown RBP eCLIP9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 TSPAN32Q96QS1 320 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 OSBPL10Q9BXB5 764 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 GSX2Q9BZM3 304 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 LIME1Q9H400 295 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 ZNF442Q9H7R0 627 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 BAIAP2Q9UQB8 552 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 UGT2A1Q9Y4X1 527 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 V9GYQ6 96 aa9.22□□□□□ -0.93
POLR2J3-213ENST00000508848 FLNAP21333 2647 aaKnown RBP9.21□□□□□ -0.93
POLR2J3-213ENST00000508848 A0A096LPE4 126 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 A0A1W2PPZ6 126 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 M0R1B8 84 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 ARHGEF9O43307 516 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 ICMTO60725 284 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 DEAF1O75398 565 aaPredicted RBP9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 SERPINI2O75830 405 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 SNAP29O95721 258 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 GASTP01350 101 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 CST2P09228 141 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 MMP7P09237 267 aaPredicted RBP9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 CECR9P0C854 216 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 BMP4P12644 408 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 ZNF35P13682 527 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 ANXA8P13928 327 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 TUBG1P23258 451 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 PCSK6P29122 969 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 CRABP1P29762 137 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 TTKP33981 857 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 EVX1P49640 407 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 PCBD1P61457 104 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 LSM6P62312 80 aaKnown RBP9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 ERVK-25P63136 954 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 MELKQ14680 651 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 ETFDHQ16134 617 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 PGGHGQ32M88 737 aa9.21□□□□□ -0.94
POLR2J3-213ENST00000508848 AGAP6Q5VW22 663 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms