RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 ZNF223Q9UK11 482 aaPredicted RBP2.3□□□□□ -2.04
SSBP2-206ENST00000506960 BLOC1S6Q9UL45 172 aa2.3□□□□□ -2.04
SSBP2-206ENST00000506960 CACNG2Q9Y698 323 aa2.3□□□□□ -2.04
SSBP2-206ENST00000506960 SLCO1B1Q9Y6L6 691 aa2.3□□□□□ -2.04
SSBP2-206ENST00000506960 IGSF10Q6WRI0 2623 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 RBMY1BA6NDE4 496 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 RBMY1EA6NEQ0 496 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 E9PBE3 544 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 MTX2O75431 263 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 RBMY1DP0C7P1 496 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 RBMY1A1P0DJD3 496 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 DBTP11182 482 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 CYBAP13498 195 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 ICAM2P13598 275 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 ZNF44P15621 663 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 GNA11P29992 359 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 FMO3P31513 532 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 NUDT1P36639 197 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 CTRLP40313 264 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 PRPHP41219 470 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 PTGDSP41222 190 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 GYG1P46976 350 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 NCBP1Q09161 790 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 TAF7Q15545 349 aaPredicted RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 ATP6AP1Q15904 470 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 DPYSL2Q16555 572 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 MICBQ29980 383 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 CCDC152Q4G0S7 254 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 MARCH8Q5T0T0 291 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 GALNT17Q6IS24 598 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 Q6ZPB1 254 aaPredicted RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 ZNF433Q8N7K0 673 aaPredicted RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 NKAPP1Q8N9T2 125 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 GMCL1P1Q8NEA9 526 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 OR6C4Q8NGE1 309 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 BLOC1S5Q8TDH9 187 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 CMTM7Q96FZ5 175 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 TIMD4Q96H15 378 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 RBM14Q96PK6 669 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 MRPL45Q9BRJ2 306 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 SLC25A39Q9BZJ4 359 aaPredicted RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 COA1Q9GZY4 146 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 RNF167Q9H6Y7 350 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 UBE2ZQ9H832 354 aaPredicted RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 SIAEQ9HAT2 523 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 THUMPD1Q9NXG2 353 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 KCNIP1Q9NZI2 227 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 NEUROG3Q9Y4Z2 214 aa2.29□□□□□ -2.04
SSBP2-206ENST00000506960 HELZ2Q9BYK8 2649 aaKnown RBP2.29□□□□□ -2.04
SSBP2-206ENST00000506960 SMG1Q96Q15 3661 aaKnown RBP2.28□□□□□ -2.04
SSBP2-206ENST00000506960 IGKV1D-8A0A087WSZ0 117 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 TRBV6-6A0A0A6YYG2 114 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 TCRBV9S1A1TA0A576 114 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 LOC110117498-PIK3R3F6TDL0 507 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 IGHG4P01861 327 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 MMP1P03956 469 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 PTMSP20962 102 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 PCMT1P22061 227 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 IL12AP29459 219 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 RPS10P46783 165 aaKnown RBP2.28□□□□□ -2.04
SSBP2-206ENST00000506960 QARSP47897 775 aaKnown RBP2.28□□□□□ -2.04
SSBP2-206ENST00000506960 GSSP48637 474 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 CSNK1DP48730 415 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 ARRB1P49407 418 aaPredicted RBP2.28□□□□□ -2.04
SSBP2-206ENST00000506960 CASP4P49662 377 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 CCL23P55773 120 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 PLD1Q13393 1074 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 PDK3Q15120 406 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 KLHL38Q2WGJ6 581 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 OR2G6Q5TZ20 316 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 AGBL2Q5U5Z8 902 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 NLRP9Q7RTR0 991 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 RALGPS2Q86X27 583 aaPredicted RBP2.28□□□□□ -2.04
SSBP2-206ENST00000506960 VSTM4Q8IW00 320 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 TMEM61Q8N0U2 210 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 C6orf223Q8N319 242 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 MFSD9Q8NBP5 474 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 CATSPER1Q8NEC5 780 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 CCDC54Q8NEL0 328 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 OR2T3Q8NH03 318 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 NDRG1Q92597 394 aaKnown RBP2.28□□□□□ -2.04
SSBP2-206ENST00000506960 CXorf40BQ96DE9 158 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 OR2M2Q96R28 347 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 NRIP2Q9BQI9 281 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 ZSCAN5AQ9BUG6 496 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 POLE4Q9NR33 117 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 SMPD3Q9NY59 655 aaPredicted RBP2.28□□□□□ -2.04
SSBP2-206ENST00000506960 PTBP2Q9UKA9 531 aaKnown RBP2.28□□□□□ -2.04
SSBP2-206ENST00000506960 TBX21Q9UL17 535 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 POLDIP2Q9Y2S7 368 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 SHROOM3Q8TF72 1996 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 SCN10AQ9Y5Y9 1956 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 KIF26AQ9ULI4 1882 aaPredicted RBP2.28□□□□□ -2.04
SSBP2-206ENST00000506960 HECTD1Q9ULT8 2610 aa2.28□□□□□ -2.04
SSBP2-206ENST00000506960 EML5Q05BV3 1969 aa2.27□□□□□ -2.05
SSBP2-206ENST00000506960 LAMA1P25391 3075 aa2.27□□□□□ -2.05
SSBP2-206ENST00000506960 GREB1Q4ZG55 1949 aa2.27□□□□□ -2.05
SSBP2-206ENST00000506960 PDCD11Q14690 1871 aaKnown RBP2.27□□□□□ -2.05
SSBP2-206ENST00000506960 GAKO14976 1311 aa2.27□□□□□ -2.05
SSBP2-206ENST00000506960 C15orf38-AP3S2A0A0A6YYH1 394 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms