RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CASQ2O14958 399 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-205ENST00000506880 ZNHIT1O43257 154 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 KHDRBS3O75525 346 aaKnown RBP7.43□□□□□ -1.22
PDGFC-205ENST00000506880 IGKV3-15P01624 115 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 F13BP05160 661 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 ALPLP05186 524 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 CST2P09228 141 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 QDPRP09417 244 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 HLA-DOBP13765 273 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 IGFBP5P24593 272 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 NTF4P34130 210 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 FXYD6P3P58550 94 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 CD47Q08722 323 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 DAG1Q14118 895 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 PPA1Q15181 289 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 PGGHGQ32M88 737 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 SLC25A30Q5SVS4 291 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 TMEM53Q6P2H8 277 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 SLC25A47Q6Q0C1 308 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.43□□□□□ -1.22
PDGFC-205ENST00000506880 CXorf67Q86X51 503 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-205ENST00000506880 GLB1L2Q8IW92 636 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 ALDH16A1Q8IZ83 802 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 DEPDC4Q8N2C3 294 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 OR9Q2Q8NGE9 314 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 OR1J2Q8NGS2 313 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 MOSPD2Q8NHP6 518 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 PYDC1Q8WXC3 89 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 BCL2L2Q92843 193 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-205ENST00000506880 MCHR2Q969V1 340 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 COG8Q96MW5 612 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 ERMAPQ96PL5 475 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-205ENST00000506880 TSPAN32Q96QS1 320 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 MNTQ99583 582 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 TMEM38BQ9NVV0 291 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 MED29Q9NX70 200 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 REV1Q9UBZ9 1251 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF346Q9UL40 294 aaKnown RBP7.43□□□□□ -1.22
PDGFC-205ENST00000506880 SLC25A15Q9Y619 301 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 U3KQV3 271 aa7.43□□□□□ -1.22
PDGFC-205ENST00000506880 SPG11Q96JI7 2443 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 PRR14LQ5THK1 2151 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 A6NNC1 897 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 H3BN98 237 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 ICMTO60725 284 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 UPK3AO75631 287 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 SNAP29O95721 258 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 IGLV1-44P01699 117 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 CBR1P16152 277 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 MSR1P21757 451 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 PCSK6P29122 969 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 CCKARP32238 428 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 CRISP1P54107 249 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 MYBPC1Q00872 1141 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 TEKQ02763 1124 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 TLE4Q04727 773 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 FAM27E3Q08E93 113 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 SCRN3Q0VDG4 424 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 ECH1Q13011 328 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 IL18R1Q13478 541 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 AQP6Q13520 282 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 CAMK2DQ13557 499 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 CEACAM16Q2WEN9 425 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 TBRG1Q3YBR2 411 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 TEX30Q5JUR7 227 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 LRFN4Q6PJG9 635 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 ZBTB49Q6ZSB9 765 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 KDM8Q8N371 416 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 SLC22A24Q8N4F4 322 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 OR4F15Q8NGB8 312 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 OR8J1Q8NGP2 316 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 LRTOMTQ8WZ04 291 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 HDAC2Q92769 488 aaKnown RBP7.42□□□□□ -1.22
PDGFC-205ENST00000506880 GTPBP3Q969Y2 492 aaKnown RBP7.42□□□□□ -1.22
PDGFC-205ENST00000506880 EME1Q96AY2 570 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 S100PBPQ96BU1 408 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 TXNDC15Q96J42 360 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 HRASLS5Q96KN8 279 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 SAMD8Q96LT4 415 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 ALKBH3Q96Q83 286 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-205ENST00000506880 DCLRE1CQ96SD1 692 aaKnown RBP7.42□□□□□ -1.22
PDGFC-205ENST00000506880 GPA33Q99795 319 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 TMEM204Q9BSN7 226 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 TSSK6Q9BXA6 273 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 VNN3Q9NY84 501 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 HAO2Q9NYQ3 351 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 SEC14L4Q9UDX3 406 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 PRSS50Q9UI38 385 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 OAZ3Q9UMX2 235 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 SPEF1Q9Y4P9 236 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 IER3IP1Q9Y5U9 82 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 HSPE1-MOB4S4R3N1 261 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 CRYBG3Q68DQ2 2970 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 CACNA1DQ01668 2161 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 RTTNQ86VV8 2226 aa7.42□□□□□ -1.22
PDGFC-205ENST00000506880 ANKRD17O75179 2603 aaKnown RBP7.41□□□□□ -1.22
PDGFC-205ENST00000506880 ZAR1LA6NP61 321 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 H0YHG0 523 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 ARHGEF9O43307 516 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 APOC1P02654 83 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms