RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 C14orf166Q9Y224 244 aaKnown RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 SLC22A13Q9Y226 551 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 ZNF646O15015 1829 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 COL4A6Q14031 1691 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 PRSS37A4D1T9 235 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 TPOP07202 933 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 CT45A8P0DMV1 189 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 CT45A9P0DMV2 189 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 SELENBP1Q13228 472 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 CT45A2Q5DJT8 189 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 ARTNQ5T4W7 220 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 CPT1CQ8TCG5 803 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 ZNF431Q8TF32 576 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 NANOS1Q8WY41 292 aaKnown RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 ZNF764Q96H86 408 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 CGGBP1Q9UFW8 167 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 SLC5A6Q9Y289 635 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 GCM2O75603 506 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 TMEM205Q6UW68 189 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 KIF18BQ86Y91 864 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 GALNT11Q8NCW6 608 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 ROBO4Q8WZ75 1007 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 TM4SF19Q96DZ7 209 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 OR52A1Q9UKL2 312 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 RCE1Q9Y256 329 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 VSTM5A8MXK1 200 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 PRICKLE3O43900 615 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 GSTT2P0CG29 244 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 SLC37A1P57057 533 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 CDK5Q00535 292 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 WIPI1Q5MNZ9 446 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 HES3Q5TGS1 186 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 NPSR1Q6W5P4 371 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 CD163Q86VB7 1156 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 OR8H3Q8N146 312 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 CLDN22Q8N7P3 220 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 LUZP4Q9P127 313 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 ICE1Q9Y2F5 2266 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 RAB3DO95716 219 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 SERPINA5P05154 406 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.36
TCOF1-207ENST00000504761 SRMP19623 302 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 NR4A2P43354 598 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 BAIAP2L2Q6UXY1 529 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 ZNF454Q8N9F8 522 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 MFRPQ9BY79 579 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 TXNIPQ9H3M7 391 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 FAIMQ9NVQ4 179 aa12.77□□□□□ -0.36
TCOF1-207ENST00000504761 PRAMEF27A3QJZ7 478 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 TNFSF11O14788 317 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 INSL4Q14641 139 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 GLYATL3Q5SZD4 288 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 IQCF2Q8IXL9 164 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 MRGPRX4Q96LA9 322 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 SPACA5Q96QH8 159 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 DCLRE1CQ96SD1 692 aaKnown RBP12.77□□□□□ -0.37
TCOF1-207ENST00000504761 GPA33Q99795 319 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 C1QTNF6Q9BXI9 259 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 TBCCD1Q9NVR7 557 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 PLEKHJ1Q9NW61 149 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 ABRACLQ9P1F3 81 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 MGAT4CQ9UBM8 478 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 A0A0B4J203 849 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 ALG1L2C9J202 215 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 ACTBP60709 375 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 ACTG1P63261 375 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 TRA2AQ13595 282 aaKnown RBP eCLIP12.77□□□□□ -0.371e-7■■■■■ 31.7
TCOF1-207ENST00000504761 TRIP6Q15654 476 aaKnown RBP12.77□□□□□ -0.37
TCOF1-207ENST00000504761 PAPOLGQ9BWT3 736 aaKnown RBP12.77□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF768Q9H5H4 540 aaKnown RBP12.77□□□□□ -0.37
TCOF1-207ENST00000504761 CPNE5Q9HCH3 593 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 CACNG2Q9Y698 323 aa12.77□□□□□ -0.37
TCOF1-207ENST00000504761 LOC102725191A0A1B0GVB3 256 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 STMND1H3BQB6 276 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 IFNA21P01568 189 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 THBS2P35442 1172 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 UGT2B10P36537 528 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 MTNR1BP49286 362 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF81P51508 661 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 OR10A3P58181 314 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 FMODQ06828 376 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 MYBPHQ13203 477 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 MAML2Q8IZL2 1156 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 BATF2Q8N1L9 274 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 ZSCAN4Q8NAM6 433 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 CSNK2A3Q8NEV1 391 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 TOMM40LQ969M1 308 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 SCGB3A2Q96PL1 93 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 LIN7BQ9HAP6 207 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 B3GALT5Q9Y2C3 310 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 TMEM184BQ9Y519 407 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 FNDC1Q4ZHG4 1894 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 A0A1W2PR77 199 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 DPM1O60762 260 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 ATP6V1G1O75348 118 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 SFTPBP07988 381 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 MOB3CQ70IA8 216 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms