RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 MED20Q9H944 212 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 SLC25A19Q9HC21 320 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 SRA1Q9HD15 236 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 TAS2R16Q9NYV7 291 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 PLEKHB1Q9UF11 243 aaPredicted RBP11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 DOPEY1Q5JWR5 2465 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 ICE1Q9Y2F5 2266 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 OR6C68A6NDL8 312 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 FAM183AA6NL82 134 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 RPL36A-HNRNPH2H7BZ11 118 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 DCTN6O00399 190 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 IDH3BO43837 385 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 SLC16A7O60669 478 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 CNOT4O95628 575 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 ATP6V1G2O95670 118 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 SNAP29O95721 258 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 RENP00797 406 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 CTLA4P16410 223 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 PSMB1P20618 241 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 ESRRGP62508 458 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 TUBA1BP68363 451 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 TUBA4AP68366 448 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 NPRL3Q12980 569 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 CRMP1Q14194 572 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 P2RY6Q15077 328 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 GABRA6Q16445 453 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 KLHL24Q6TFL4 600 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 MEX3BQ6ZN04 569 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 TUBA1AQ71U36 451 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 ABHD12BQ7Z5M8 362 aaPredicted RBP11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 OR9Q1Q8NGQ5 310 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 ZNRF4Q8WWF5 429 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 OTULINQ96BN8 352 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 WFIKKN1Q96NZ8 548 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 DDOQ99489 341 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 NUAK2Q9H093 628 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 TOR3AQ9H497 397 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 RPRD1BQ9NQG5 326 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 TVP23BQ9NYZ1 205 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 VSX1Q9NZR4 365 aaPredicted RBP11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 BAIAP2Q9UQB8 552 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 GPR52Q9Y2T5 361 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 UGT2A1Q9Y4X1 527 aa11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 KLF2Q9Y5W3 355 aaPredicted RBP11.64□□□□□ -0.55
PDLIM7-212ENST00000504380 A0A1W2PPL8 197 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 ZAR1LA6NP61 321 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 CENPBD1B2RD01 187 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 CASQ2O14958 399 aaPredicted RBP11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 MPZL1O95297 269 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 SCG5P05408 212 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 CLUP10909 449 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 B4GALT1P15291 398 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 PYCR1P32322 319 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 CENPAP49450 140 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 SGCAQ16586 387 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 THEM4Q5T1C6 240 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 OGFRL1Q5TC84 451 aaPredicted RBP11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 ZNF813Q6ZN06 617 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 ADCK1Q86TW2 530 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 OR6V1Q8N148 313 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 WDR31Q8NA23 367 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 OR52N5Q8NH56 324 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 BCL2L2Q92843 193 aaPredicted RBP11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 FOXB1Q99853 325 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 HCAR1Q9BXC0 346 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 C1QTNF6Q9BXI9 259 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 GABARAPL3Q9BY60 117 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 NELFAQ9H3P2 528 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 KLHL21Q9UJP4 597 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 COA3Q9Y2R0 106 aaPredicted RBP11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 ORC6Q9Y5N6 252 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 CENPEQ02224 2701 aa11.63□□□□□ -0.55
PDLIM7-212ENST00000504380 PRR14LQ5THK1 2151 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 SH3D21A4FU49 640 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 ZNF503-AS2A6NEH8 195 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 RIIAD1A6NNX1 92 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 ZNF99A8MXY4 864 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 DLGAP1O14490 977 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 SURF4O15260 269 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 PRKYO43930 277 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 GYPBP06028 91 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 THBDP07204 575 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 PATE4P0C8F1 98 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 ZNF84P51523 738 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 ZNF133P52736 654 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 RAD23AP54725 363 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 SNAPC1Q16533 368 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 TBRG1Q3YBR2 411 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 C10orf128Q5T292 105 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 SLX4IPQ5VYV7 408 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 C12orf73Q69YU5 71 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 ANKRD16Q6P6B7 361 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 BCDIN3DQ7Z5W3 292 aaKnown RBP11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 WFDC8Q8IUA0 241 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 STEAP2Q8NFT2 490 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 OR51L1Q8NGJ5 315 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 FGFBP3Q8TAT2 258 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 UBE2FQ969M7 185 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms