RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 KIF26AQ9ULI4 1882 aaPredicted RBP2.21□□□□□ -2.06
SUB1-204ENST00000504016 DDX49Q9Y6V7 483 aaKnown RBP2.21□□□□□ -2.06
SUB1-204ENST00000504016 IGLV2-18A0A075B6J9 118 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 A0A0U1RQS6 177 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 C7orf66A4D0T2 115 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 SGK1O00141 431 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 EIF3GO75821 320 aaKnown RBP eCLIP2.2□□□□□ -2.06
SUB1-204ENST00000504016 RBBP9O75884 186 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 HRH1P35367 487 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 MAS1LP35410 378 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 CEACAM6P40199 344 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 PRPHP41219 470 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 HNMTP50135 292 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 TPMTP51580 245 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 GBX2P52951 348 aaPredicted RBP2.2□□□□□ -2.06
SUB1-204ENST00000504016 IL24Q13007 206 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 ECH1Q13011 328 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 MAB21L1Q13394 359 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 GK3PQ14409 553 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 RGNQ15493 299 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 ZNF77Q15935 545 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 ANKDD1AQ495B1 522 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 PTPN20Q4JDL3 420 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 ZNF836Q6ZNA1 936 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 ABHD13Q7L211 337 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 EFL1Q7Z2Z2 1120 aaKnown RBP2.2□□□□□ -2.06
SUB1-204ENST00000504016 BIVMQ86UB2 503 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 BHLHE23Q8NDY6 225 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 OR4F6Q8NGB9 312 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 OR10G4Q8NGN3 311 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 ZNF461Q8TAF7 563 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 TM4SF18Q96CE8 201 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 SLC41A3Q96GZ6 507 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 ZNF578Q96N58 590 aaPredicted RBP2.2□□□□□ -2.06
SUB1-204ENST00000504016 P2RX4Q99571 388 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 CCT7Q99832 543 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 FOXC2Q99958 501 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 MRPL37Q9BZE1 423 aaKnown RBP2.2□□□□□ -2.06
SUB1-204ENST00000504016 ROPN1BQ9BZX4 212 aaPredicted RBP2.2□□□□□ -2.06
SUB1-204ENST00000504016 KCNJ16Q9NPI9 418 aa2.2□□□□□ -2.06
SUB1-204ENST00000504016 ZNF705GA8MUZ8 300 aaPredicted RBP2.19□□□□□ -2.06
SUB1-204ENST00000504016 RBFOX2O43251 390 aaKnown RBP eCLIP2.19□□□□□ -2.06
SUB1-204ENST00000504016 SPAG6O75602 509 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 SURF6O75683 361 aaKnown RBP2.19□□□□□ -2.06
SUB1-204ENST00000504016 VAMP5O95183 116 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 SLC25A14O95258 325 aaPredicted RBP2.19□□□□□ -2.06
SUB1-204ENST00000504016 C6orf47O95873 294 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 BCHEP06276 602 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 C2P06681 752 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 ARFIP1P53367 373 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 UGT2B15P54855 530 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 FBXW4P57775 412 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 ACTG2P63267 376 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 GPM6BQ13491 265 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 ARHGAP19Q14CB8 494 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 KCTD21Q4G0X4 260 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 PRMT9Q6P2P2 845 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 ZNF880Q6PDB4 577 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 CEMP1Q6PRD7 247 aaPredicted RBP2.19□□□□□ -2.06
SUB1-204ENST00000504016 SHISA6Q6ZSJ9 500 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 HMGN2P46Q86SG4 172 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 LGI3Q8N145 548 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 LRRC75A-AS1Q8N1F1 130 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 DEDD2Q8WXF8 326 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 STMN2Q93045 179 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 TRIM44Q96DX7 344 aaPredicted RBP2.19□□□□□ -2.06
SUB1-204ENST00000504016 RMI2Q96E14 147 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 KCTD14Q9BQ13 255 aaPredicted RBP2.19□□□□□ -2.06
SUB1-204ENST00000504016 SGK2Q9HBY8 427 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 ZNF639Q9UID6 485 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 NPTNQ9Y639 398 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 COL1A2P08123 1366 aa2.19□□□□□ -2.06
SUB1-204ENST00000504016 A0A1W2PPV9 198 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 ARHGEF35A5YM69 484 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 SPECC1L-ADORA2AF8WAN1 911 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 CPLX1O14810 134 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 BET1O15155 118 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 RAD51BO15315 384 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 AIFM1O95831 613 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 CISD3P0C7P0 127 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 PSMC3P17980 439 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 SSR1P43307 286 aaKnown RBP2.18□□□□□ -2.06
SUB1-204ENST00000504016 YAP1P46937 504 aaKnown RBP2.18□□□□□ -2.06
SUB1-204ENST00000504016 CEBPDP49716 269 aaPredicted RBP2.18□□□□□ -2.06
SUB1-204ENST00000504016 CDH4P55283 916 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 ESRRGP62508 458 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 CHIT1Q13231 466 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 LRRC23Q53EV4 343 aaPredicted RBP2.18□□□□□ -2.06
SUB1-204ENST00000504016 SPECC1LQ69YQ0 1117 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 RGS9BPQ6ZS82 235 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 H2BFWTQ7Z2G1 175 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 EIF1ADQ8N9N8 165 aaKnown RBP2.18□□□□□ -2.06
SUB1-204ENST00000504016 OR52P1PQ8NH57 321 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 OR10C1Q96KK4 312 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 NAP1L5Q96NT1 182 aaPredicted RBP2.18□□□□□ -2.06
SUB1-204ENST00000504016 SH3GL3Q99963 347 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 SLC25A2Q9BXI2 301 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 LINC00597Q9H2U6 94 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 GPATCH2LQ9NWQ4 482 aa2.18□□□□□ -2.06
SUB1-204ENST00000504016 ZNRD1Q9P1U0 126 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms