RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	FNDC8	Q8TC99	324 aa		10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	OTULIN	Q96BN8	352 aa		10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	CNTNAP3B	Q96NU0	1288 aa		10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	CDCA4	Q9BXL8	241 aa		10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	MRPS26	Q9BYN8	205 aa	Known RBP	10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	CNTNAP3	Q9BZ76	1288 aa		10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	CALHM2	Q9HA72	323 aa		10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	ADGRL4	Q9HBW9	690 aa		10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	SRA1	Q9HD15	236 aa	Known RBP	10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	ASF1B	Q9NVP2	202 aa		10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	DIMT1	Q9UNQ2	313 aa	Known RBP	10.76	□□□□□ -0.69
MATR3-231	ENST00000502394	IRGM	A1A4Y4	181 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	MBD3L3	A6NE82	208 aa	Predicted RBP	10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	ZNF726	A6NNF4	738 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	RGS10	O43665	173 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	SLC16A7	O60669	478 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	WDR1	O75083	606 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	SS18L1	O75177	396 aa	Predicted RBP	10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	TF	P02787	698 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	TFAP2A	P05549	437 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	YES1	P07947	543 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	SBK2	P0C263	348 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	GAA	P10253	952 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	GABRA1	P14867	456 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	EDNRA	P25101	427 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	DCK	P27707	260 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	PTGER4	P35408	488 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	CENPA	P49450	140 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	POU4F2	Q12837	409 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	LY6D	Q14210	128 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	ETFDH	Q16134	617 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	LRFN4	Q6PJG9	635 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	LYPD4	Q6UWN0	246 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	FOXL2NB	Q6ZUU3	175 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	SEM1	Q6ZVN7	128 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	TUSC5	Q8IXB3	177 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	TIGD4	Q8IY51	512 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	OR4F15	Q8NGB8	312 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	OR51L1	Q8NGJ5	315 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	MYDGF	Q969H8	173 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	MCHR2	Q969V1	340 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	INTS12	Q96CB8	462 aa	Known RBP	10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	ZMYND19	Q96E35	227 aa	Predicted RBP	10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	TMEM80	Q96HE8	168 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	PRRG4	Q9BZD6	226 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	GLRX2	Q9NS18	164 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	GLTP	Q9NZD2	209 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	EMC3	Q9P0I2	261 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	FAM215A	Q9Y5M1	114 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	SPTA1	P02549	2419 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	ATRX	P46100	2492 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	GTF3C1	Q12789	2109 aa		10.75	□□□□□ -0.69
MATR3-231	ENST00000502394	SVIL	O95425	2214 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	USP24	Q9UPU5	2620 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	FAM171A2	A8MVW0	826 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	SLC43A1	O75387	559 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	KHDRBS3	O75525	346 aa	Known RBP	10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	APOL3	O95236	402 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	PSKH1	P11801	424 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	NR2C1	P13056	603 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	EEF1B2	P24534	225 aa	Known RBP	10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	AGTR1	P30556	359 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	CSNK1A1	P48729	337 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	BLVRA	P53004	296 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	CLRN1	P58418	232 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	RPS7	P62081	194 aa	Known RBP	10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	BLMH	Q13867	455 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	TBCE	Q15813	527 aa	Predicted RBP	10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	CARD17	Q5XLA6	110 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	XAF1	Q6GPH4	301 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	DNM1P34	Q6PK57	102 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	SHF	Q7M4L6	423 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	AAED1	Q7RTV5	226 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	NUFIP2	Q7Z417	695 aa	Known RBP	10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	CD163	Q86VB7	1156 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	STX19	Q8N4C7	294 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	C9orf106	Q8NAJ2	232 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	POMGNT2	Q8NAT1	580 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	PROKR2	Q8NFJ6	384 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	SLC26A10	Q8NG04	563 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	OR51G2	Q8NGK0	314 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	RBP7	Q96R05	134 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	TRIB1	Q96RU8	372 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	LINC00470	Q9BZP3	86 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	MRPL22	Q9NWU5	206 aa	Known RBP	10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	CLEC4A	Q9UMR7	237 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	COA3	Q9Y2R0	106 aa	Predicted RBP	10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	NOSIP	Q9Y314	301 aa	Known RBP	10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	UGT2A1	Q9Y4X1	527 aa		10.74	□□□□□ -0.69
MATR3-231	ENST00000502394	SELENOF	O60613	162 aa		10.73	□□□□□ -0.69
MATR3-231	ENST00000502394	UPK3A	O75631	287 aa		10.73	□□□□□ -0.69
MATR3-231	ENST00000502394	RAB36	O95755	333 aa		10.73	□□□□□ -0.69
MATR3-231	ENST00000502394	FADS2	O95864	444 aa	Known RBP	10.73	□□□□□ -0.69
MATR3-231	ENST00000502394	GPANK1	O95872	356 aa		10.73	□□□□□ -0.69
MATR3-231	ENST00000502394	HRG	P04196	525 aa		10.73	□□□□□ -0.69
MATR3-231	ENST00000502394	TPO	P07202	933 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms