RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 SLAMF8Q9P0V8 285 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 GPR160Q9UJ42 338 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 USH1CQ9Y6N9 552 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 SLC22A23A1A5C7 686 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 DHHO43323 396 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 TPD52L2O43399 206 aaKnown RBP13.63□□□□□ -0.23
MUC1-220ENST00000498431 TGDSO95455 350 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 SNAP29O95721 258 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 RBMXP38159 391 aaKnown RBP13.63□□□□□ -0.23
MUC1-220ENST00000498431 UCP2P55851 309 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 GNGT1P63211 74 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 CDK6Q00534 326 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 TEKQ02763 1124 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 TUSC1Q2TAM9 212 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 MMEL1Q495T6 779 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 GCNT6Q5T4J0 391 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 REEP3Q6NUK4 255 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 SAP30LQ9HAJ7 183 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 DECR2Q9NUI1 292 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 DDX28Q9NUL7 540 aaKnown RBP13.63□□□□□ -0.23
MUC1-220ENST00000498431 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 TAS2R5Q9NYW4 299 aa13.63□□□□□ -0.23
MUC1-220ENST00000498431 UBDO15205 165 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 MT-ATP6P00846 226 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 IGHV3-13P01766 116 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 PGA4P0DJD7 388 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 PGA3P0DJD8 388 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 TROVE2P10155 538 aaKnown RBP eCLIP13.62□□□□□ -0.23
MUC1-220ENST00000498431 ZFP36P26651 326 aaKnown RBP13.62□□□□□ -0.23
MUC1-220ENST00000498431 AQP1P29972 269 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 DEFA6Q01524 100 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 FOXL1Q12952 345 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 TBC1D28Q2M2D7 210 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 HFEQ30201 348 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 SPRNQ5BIV9 151 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 TMEM53Q6P2H8 277 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 LINC00114Q6XXX2 140 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 KRT73Q86Y46 540 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 LRRC17Q8N6Y2 441 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 CCL17Q92583 94 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 TAF15Q92804 592 aaKnown RBP eCLIP13.62□□□□□ -0.23
MUC1-220ENST00000498431 ZNF566Q969W8 418 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 LRRC58Q96CX6 371 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 TIMD4Q96H15 378 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 SLC25A44Q96H78 314 aaPredicted RBP13.62□□□□□ -0.23
MUC1-220ENST00000498431 C1orf147Q96MC9 270 aaPredicted RBP13.62□□□□□ -0.23
MUC1-220ENST00000498431 GAL3ST1Q99999 423 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 SIKE1Q9BRV8 207 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 SPATA5L1Q9BVQ7 753 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 IKZF5Q9H5V7 419 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 TANC2Q9HCD6 1990 aa13.62□□□□□ -0.23
MUC1-220ENST00000498431 M0R3H8 397 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 SPRY3O43610 288 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 MFN2O95140 757 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 FARS2O95363 451 aaKnown RBP13.61□□□□□ -0.23
MUC1-220ENST00000498431 CH25HO95992 272 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 IGHV1-46P01743 117 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 THY1P04216 161 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 QDPRP09417 244 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 GATA3P23771 443 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 FPR2P25090 351 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 MPV17P39210 176 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 ZNF81P51508 661 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 SCARB2Q14108 478 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 SPATA46Q5T0L3 261 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 LRIF1Q5T3J3 769 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 SLC16A14Q7RTX9 510 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 SMYD1Q8NB12 490 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 CPEB3Q8NE35 698 aaKnown RBP13.61□□□□□ -0.23
MUC1-220ENST00000498431 OR1J1Q8NGS3 322 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 RAB1CQ92928 201 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 BCL2L14Q9BZR8 327 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 NTN4Q9HB63 628 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 NPHS2Q9NP85 383 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 UBAP1Q9NZ09 502 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 VAPAQ9P0L0 249 aa13.61□□□□□ -0.23
MUC1-220ENST00000498431 LEF1Q9UJU2 399 aaPredicted RBP13.61□□□□□ -0.23
MUC1-220ENST00000498431 ISPDA4D126 451 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 GMNCA6NCL1 334 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 DNAJC9-AS1A6NH13 148 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 ZSCAN5BA6NJL1 495 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 RNF13O43567 381 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 UBOX5O94941 541 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 OR6A2O95222 327 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 LYPD3O95274 346 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 MMP7P09237 267 aaPredicted RBP13.6□□□□□ -0.23
MUC1-220ENST00000498431 DRD4P21917 467 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 MMP15P51511 669 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 NPTX1Q15818 432 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 ZNF74Q16587 644 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 SLC36A2Q495M3 483 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 PAGE3Q5JUK9 113 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 SWT1Q5T5J6 900 aaKnown RBP13.6□□□□□ -0.23
MUC1-220ENST00000498431 EPGNQ6UW88 154 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 TREML4Q6UXN2 200 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 RETREG3Q86VR2 466 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 RANBP3LQ86VV4 465 aaPredicted RBP13.6□□□□□ -0.23
MUC1-220ENST00000498431 TSPYL5Q86VY4 417 aaPredicted RBP13.6□□□□□ -0.23
MUC1-220ENST00000498431 ARMC8Q8IUR7 673 aa13.6□□□□□ -0.23
MUC1-220ENST00000498431 FUNDC1Q8IVP5 155 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms